Factsheet for Bra000318.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83468	Canola	plasma membrane	88.4	95.46
CDY44247	Canola	nucleus	88.07	94.24
Bra037689.1-P	Field mustard	cytosol	64.87	73.24
Bra004776.1-P	Field mustard	nucleus	74.62	71.04
AT2G43680.1	Thale cress	nucleus	75.63	67.26
Bra007471.1-P	Field mustard	nucleus	54.45	65.32
KRH50198	Soybean	cytosol	46.39	51.78
KRH71267	Soybean	cytosol	45.21	50.28
Solyc08g014280.2.1	Tomato	cytosol	42.35	46.75
PGSC0003DMT400041427	Potato	cytosol	41.51	46.17
VIT_05s0094g00530.t01	Wine grape	cytosol	46.22	45.99
Solyc06g053450.2.1	Tomato	nucleus	38.82	39.02
PGSC0003DMT400042121	Potato	cytosol, mitochondrion	39.5	38.09
GSMUA_Achr8P32220_001	Banana	cytosol	27.56	37.53
GSMUA_Achr7P02870_001	Banana	mitochondrion	18.32	36.21
Os01t0896200-01	Rice	mitochondrion	18.49	32.64
EES01898	Sorghum	cytosol	30.08	31.79
Zm00001d012167_P001	Maize	cytosol	29.58	30.45
Bra028854.1-P	Field mustard	nucleus, plastid	20.84	27.87
HORVU3Hr1G089690.1	Barley	cytosol	28.57	27.07
TraesCS3D01G392900.1	Wheat	cytosol	28.24	27.01
TraesCS3B01G431200.1	Wheat	cytosol	28.24	26.84
Bra033443.1-P	Field mustard	cytosol	19.83	26.52
TraesCS3A01G398900.1	Wheat	cytosol	27.56	26.32
Bra005462.1-P	Field mustard	cytosol, plastid	11.6	26.04
Bra009554.1-P	Field mustard	cytosol	19.5	24.63
Bra021888.1-P	Field mustard	plastid	10.42	23.94
Bra034294.1-P	Field mustard	nucleus	15.13	22.67
Bra021588.1-P	Field mustard	cytosol, plastid	9.92	22.35
Bra000717.1-P	Field mustard	nucleus	15.97	21.99
Bra034081.1-P	Field mustard	nucleus	16.13	21.62
Bra033284.1-P	Field mustard	nucleus	18.82	21.29
Bra016042.1-P	Field mustard	cytosol	14.62	21.12
Bra031331.1-P	Field mustard	cytosol	13.45	20.83
Bra017988.1-P	Field mustard	nucleus	11.93	20.29
Bra019589.1-P	Field mustard	nucleus	16.13	20.21
Bra001855.1-P	Field mustard	cytosol	11.43	19.83
Bra017997.1-P	Field mustard	nucleus, plastid	15.8	19.79
Bra025971.1-P	Field mustard	nucleus	12.44	19.73
Bra000930.1-P	Field mustard	mitochondrion, nucleus	17.14	19.43
Bra001299.1-P	Field mustard	nucleus	14.12	17.76
Bra023846.1-P	Field mustard	cytosol	11.76	16.79

Protein Annotations

EnsemblPlants:Bra000318.1	EnsemblPlants:Bra000318.1-P	EnsemblPlantsGene:Bra000318	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF18
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	PRINTS:PR01217	SEG:seg	SMART:SM00015
UniParc:UPI000253FD51	UniProt:M4C7Z0	MapMan:20.6.2	:	:	:

Description

AT2G43680 (E=9e-150) IQD14 | IQD14; calmodulin binding

Coordinates

chrA03:+:10529218..10531266

Molecular Weight (calculated)

66193.6 Da

IEP (calculated)

11.406

GRAVY (calculated)

-0.983

Length

595 amino acids

Sequence
(BLAST)

001: MEKKGSWFSK IKRVFTPHSK EKLGSEAERK SGKEKRKKGF GKLRCGETSS FLPIHREPSS IEKIFGEAER DHNLVFRPPD LSNPSSPSPP LRPASPKPPP
101: PLPRAHLPRS ISPKPPDGSK PLSTSASAPP PPASTRVPSQ RVSPPSVLSP KPVPQRVASP QAVSIKPPSP RPTSPRGDSP QALPLNPSPR LETPEPSSPK
201: PPSPREEPPK LNAPRPTTSR SPSPKAVSPK AVQRQESVSR PEPALSVQHA SATKIQATFR GYKARRSFRA LKGLARLQGV VKGYNVKRQT VNAMKYMQQL
301: VRVRSQIQSR RIKTSENQAQ VEKDEAKWAA FKAGNENWDD SVLTKEERDT RSQRKIDAVI KRERYMAYAY SHKLWKNSPK SAQDVQHSGG LSLWWNWGDR
401: QLPLASHVPN HSQTLRDYMQ TPTRLSPSPL SQSSNQQRFR QDNNFDTSTP TSSRSRFLTP SRYSIGRLRG QDSPFKDDDS FASCPPYPRY MAPTVSAKAK
501: VRTNSKPKER VMGTPTVSSE TRRMSYPLTQ QGLDMFRWNK GSLHMSNNGS QRGPGSPGGV VLEKHKTLKS VGNLSIDTTV SMPATVGRKP FNRYA

Best Arabidopsis Sequence Match ( AT2G43680.5 )
(BLAST)

001: MVKKGSWFSA IKRVFTPHSK EKLANEPERK SGKEKKKKGF GKLRHGETNS FLPIFREPSS IEKILGEAER DHNLVFRPPT PDRPNPYSAS PPPRPASPRV
101: ASPRPTSPRV ASPRVPSPRA EVPRTLSPKP PSPRAEVPRS LSPKPPSPRA DLPRSLSPKP FDRSKPSSAS ANAPPTLRPA STRVPSQRIT PHSVPSPRPS
201: SPRGASPQAI SSKPPSPRAE PPTLDTPRPP SPRAASLRAD PPRLDAARPT TPRPPSPLAD APRLDAPRPT TPKPPSPRSD PPRLDAPRPT TPKPPSPRSV
301: SPRAVQRREI VYRPEPTLPV QHASATKIQG AFRGYMARKS FRALKGLVRL QGVVRGYSVK RQTINAMKYM QQVVRVQSQI QSRRIKMLEN QAQVEKDEAK
401: WAASEAGNDN WDDSVLTKEE RDSRSQRKTD AIIKRERSMA YAYSRKLWKN SPKSTQDNRS FPQWWNWVDR QNPLASPAPS YSQPQRDFRL TPSRLCPSPL
501: SQSSKQHHIR LDNHFDTSTP RSSRSTFHTP SRPIHTGTSR YSRGRLRGQD SPFKDDDSLT SCPPFPSYMA PTVSAKAKVR PNSNPKERVM GTPVSEKRRM
601: SYPPTQDTFR WNKGSLVMSN SSSHRGPGSP GGVVLEKHKT LKSVGNLSIG STASMATTVG RKEFNRFV

Arabidopsis Description

IQD14IQD14 [Source:UniProtKB/TrEMBL;Acc:A0A178VRE6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.