Factsheet for Os01t0896200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P02870_001	Banana	mitochondrion	41.54	46.51
EES01898	Sorghum	cytosol	73.0	43.69
Zm00001d012167_P001	Maize	cytosol	71.22	41.52
TraesCS3D01G392900.1	Wheat	cytosol	70.03	37.94
TraesCS3B01G431200.1	Wheat	cytosol	70.33	37.86
HORVU3Hr1G089690.1	Barley	cytosol	69.73	37.42
TraesCS3A01G398900.1	Wheat	cytosol	69.14	37.4
GSMUA_Achr8P32220_001	Banana	cytosol	43.03	33.18
Bra007471.1-P	Field mustard	nucleus	35.01	23.79
CDX71881	Canola	nucleus	34.72	23.68
CDY05984	Canola	nucleus	34.72	23.64
AT3G59690.2	Thale cress	nucleus	36.2	23.6
KRH71267	Soybean	cytosol	37.09	23.36
KRH50198	Soybean	cytosol	36.8	23.26
CDY23391	Canola	cytosol	31.45	22.99
VIT_05s0094g00530.t01	Wine grape	cytosol	40.65	22.91
CDY30433	Canola	cytosol	30.56	22.89
Solyc08g014280.2.1	Tomato	cytosol	35.91	22.45
PGSC0003DMT400041427	Potato	cytosol	35.01	22.06
Bra037689.1-P	Field mustard	cytosol	30.86	19.73
Os05t0123200-01	Rice	plasma membrane	27.3	19.41
Solyc06g053450.2.1	Tomato	nucleus	32.94	18.75
CDX79809	Canola	nucleus	33.23	18.73
CDY66694	Canola	nucleus	32.94	18.53
CDX83468	Canola	plasma membrane	30.27	18.51
Bra000318.1-P	Field mustard	nucleus	32.64	18.49
Os01t0833800-01	Rice	plasma membrane	26.71	18.0
CDY44247	Canola	nucleus	29.67	17.99
Bra004776.1-P	Field mustard	nucleus	33.23	17.92
PGSC0003DMT400042121	Potato	cytosol, mitochondrion	32.34	17.67
AT2G43680.1	Thale cress	nucleus	32.64	16.44
Os05t0541100-01	Rice	plastid	18.69	15.44
Os01t0194200-01	Rice	cytosol	19.29	14.71
Os03t0787200-01	Rice	cytosol	18.4	14.69
Os05t0463300-00	Rice	plasma membrane	21.36	14.34
Os01t0708700-01	Rice	cytosol	18.1	13.83
Os12t0619000-01	Rice	cytosol	18.1	13.8
Os08t0115200-01	Rice	cytosol	21.96	13.63
Os03t0648300-01	Rice	cytosol	16.62	12.73
Os06t0155300-01	Rice	plasma membrane	13.06	12.46

Protein Annotations

EnsemblPlants:Os01t0896200-01	EnsemblPlantsGene:Os01g0896200	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF18	ProteinID:BAS75700.1
SEG:seg	UniParc:UPI0000DD8E55	UniProt:A0A0P0VBK5	MapMan:20.6.2	:	:

Description

Similar to SF16 protein. (Os01t0896200-01)

Coordinates

chr1:+:38948587..38950479

Molecular Weight (calculated)

36475.5 Da

IEP (calculated)

12.082

GRAVY (calculated)

-0.494

Length

337 amino acids

Sequence
(BLAST)

001: RSLRGLIRLQ GVVRGPSVRR QTAHAMRCMQ MLVRVQSQVR ASRVEAMERR NRHHHAAMLR DAARWRAASQ DGGIWEDSLL SRDEMDARTK RKVEAVIKRE
101: RALAYAYSHQ LLKATPMAAH AILADLQSGR NPWWWTPIER RHEAEAAAAL LSRQRVEHVG NGGGGGRHVA VTATPARSVV SSYSTATATT AARPRATRPA
201: KVASSYGGGG SIRDDESLTS CPAFGGALPN YMTPTMSASA KARARAQMLR QQQEKQAQAA QEKPRFSFGL GQSIGSWAKS PFWKGGAAAA PPSISSRVAT
301: PAASVAGRHR PTRSSVSELS VDSAVSMPAG IGRRTFK

Best Arabidopsis Sequence Match ( AT3G59690.1 )
(BLAST)

001: MGKKGSWFSA IKRVFTPHSK EKQLSNNNQE PEIKSENKEK KKKGFGKKLR NGETNSFLPI FRQPSSIEKI LSEAEREHNL VFRPPTPTDR ANSSSTSVAS
101: PLVRPASPKV PSQRYVSSPK PISPRVAYPQ VHYPKPPSPK PPSPRAVSPR IVQRREFVHR PEPSLLVKNA YAIKIQAAFR GYMARRSFRA LKGLVRLQGV
201: VRGHSVKRQT MNAMKYMQLL VRVQTQVQSR RIQMLENRAR NDKDDTKLVS SRMSDDWDDS VLTKEEKDVR LHRKIDAMIK RERSMAYAYS HQLWKNSPKS
301: AQDIRTSGFP LWWNWVDRQK NQNQPFRLTP TRPSLSPQPQ SSNQNHFRLN NSFDTSTPNS SKSTFVTPSR PIHTPQPYSS SVSRYSRGGG RATQDSPFKD
401: DDSLTSCPPF SAPSYMAPTV SAKAKLRANS NPKERMDRTP VSTNEKRRSS FPLGSFKWNK GSLFMSNNSN NKGPGSSSSG AVVLEKHKTL KSVGNLSIDS
501: TVSMPATIGR RAFNRFA

Arabidopsis Description

IQD13IQ-domain 13 [Source:UniProtKB/TrEMBL;Acc:Q9M199]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.