CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012167_P001	Maize	cytosol	89.52	87.2
Os01t0896200-01	Rice	mitochondrion	43.69	73.0
TraesCS3D01G392900.1	Wheat	cytosol	71.4	64.63
TraesCS3A01G398900.1	Wheat	cytosol	70.34	63.56
TraesCS3B01G431200.1	Wheat	cytosol	70.52	63.42
HORVU3Hr1G089690.1	Barley	cytosol	70.69	63.38
GSMUA_Achr8P32220_001	Banana	cytosol	37.66	48.51
GSMUA_Achr7P02870_001	Banana	mitochondrion	25.22	47.18
KRH50198	Soybean	cytosol	36.59	38.65
KRH71267	Soybean	cytosol	36.59	38.5
CDY30433	Canola	cytosol	30.37	38.0
CDY23391	Canola	cytosol	30.91	37.74
CDY05984	Canola	nucleus	32.68	37.17
Bra007471.1-P	Field mustard	nucleus	32.68	37.1
CDX71881	Canola	nucleus	32.5	37.04
VIT_05s0094g00530.t01	Wine grape	cytosol	38.19	35.95
AT3G59690.2	Thale cress	nucleus	32.86	35.78
Solyc08g014280.2.1	Tomato	cytosol	34.1	35.62
PGSC0003DMT400041427	Potato	cytosol	33.57	35.33
Bra037689.1-P	Field mustard	cytosol	30.73	32.83
CDX83468	Canola	plasma membrane	30.2	30.85
CDX79809	Canola	nucleus	32.33	30.43
CDY44247	Canola	nucleus	29.84	30.22
Bra000318.1-P	Field mustard	nucleus	31.79	30.08
CDY66694	Canola	nucleus	31.79	29.88
Solyc06g053450.2.1	Tomato	nucleus	31.08	29.56
Bra004776.1-P	Field mustard	nucleus	32.15	28.96
PGSC0003DMT400042121	Potato	cytosol, mitochondrion	31.26	28.53
KXG21175	Sorghum	cytosol	23.09	27.48
AT2G43680.1	Thale cress	nucleus	32.33	27.2
KXG33651	Sorghum	cytosol	23.09	26.1
EES14418	Sorghum	cytosol	22.38	21.95
OQU86150	Sorghum	cytosol	17.23	21.85
EES03502	Sorghum	mitochondrion	16.34	21.05
EER87873	Sorghum	nucleus	12.08	20.42
KXG24027	Sorghum	cytosol	15.28	19.55
EER90769	Sorghum	mitochondrion	15.28	19.55
EER91163	Sorghum	cytosol	14.03	18.72
OQU78148	Sorghum	cytosol	17.94	18.04
KXG22437	Sorghum	mitochondrion, plastid	15.28	15.75

Protein Annotations

EnsemblPlants:EES01898	EnsemblPlantsGene:SORBI_3003G387500	EntrezGene:8078670	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF18	PFAM:PF00612
PFscan:PS50096	ProteinID:EES01898	ProteinID:EES01898.1	RefSeq:XP_002456778.1	SEG:seg	SMART:SM00015
unigene:Sbi.19924	UniParc:UPI0001A8508C	UniProt:C5XET8	MapMan:20.6.2	:	:

Description

hypothetical protein

Coordinates

chr3:+:69917238..69919662

Molecular Weight (calculated)

62131.1 Da

IEP (calculated)

11.930

GRAVY (calculated)

-0.751

Length

563 amino acids

Sequence
(BLAST)

001: MGKKGNWFTA LKKAFTSSPK EKPPNVHQLV AQYPSSHGHG RDKKRWGGFG RTRSHAEPAS PAAGALINIP LYREPSSIEK ILGDAEMDQQ RQYYAATRAQ
101: YQITPARPTT AVAASAAAPL PQPVVGTARE RERERERSRE DKPAAVVLPL PPPSPPPLIR RFDHDREQQQ KLQQLQLQPQ SRAETEWRRQ PQPQPQPRRH
201: RAARQRAAPP DRARAAAVAI QSAFRGYMAR RNYRSLRGLI RLQGVMRGAS VRRQTAQAMR CMQTLVRVQA QVRASRVEAM ERRNRQHHGA MLRDGGRWRA
301: GSQDGGIWDD SRLTREEADA RTKRKVEAVI KRERALAYAY SHQLLKATPM AAHAILADLQ SGRSPWWWTP IERHHEPGSY RPVEPAISKP RPALAIAHRE
401: TTPMAMTAAT TPARSVVSAY SKTRTTRPVT KVGAPPAPSL SYVGSIRDDE SLTSCPAFGG VPNYMTPTLS ASAKARARAH LQQQQKAAQE KPRFSFGLGQ
501: SIGSWAKSPF WKAGGGGGLP SSRVATPAAS VAGGRHRSTR SISGLSVDST VSMPAGIGRR PFK

Best Arabidopsis Sequence Match ( AT3G59690.1 )
(BLAST)

001: MGKKGSWFSA IKRVFTPHSK EKQLSNNNQE PEIKSENKEK KKKGFGKKLR NGETNSFLPI FRQPSSIEKI LSEAEREHNL VFRPPTPTDR ANSSSTSVAS
101: PLVRPASPKV PSQRYVSSPK PISPRVAYPQ VHYPKPPSPK PPSPRAVSPR IVQRREFVHR PEPSLLVKNA YAIKIQAAFR GYMARRSFRA LKGLVRLQGV
201: VRGHSVKRQT MNAMKYMQLL VRVQTQVQSR RIQMLENRAR NDKDDTKLVS SRMSDDWDDS VLTKEEKDVR LHRKIDAMIK RERSMAYAYS HQLWKNSPKS
301: AQDIRTSGFP LWWNWVDRQK NQNQPFRLTP TRPSLSPQPQ SSNQNHFRLN NSFDTSTPNS SKSTFVTPSR PIHTPQPYSS SVSRYSRGGG RATQDSPFKD
401: DDSLTSCPPF SAPSYMAPTV SAKAKLRANS NPKERMDRTP VSTNEKRRSS FPLGSFKWNK GSLFMSNNSN NKGPGSSSSG AVVLEKHKTL KSVGNLSIDS
501: TVSMPATIGR RAFNRFA

Arabidopsis Description

IQD13IQ-domain 13 [Source:UniProtKB/TrEMBL;Acc:Q9M199]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.