CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038861_P001	Maize	cytosol, plastid	67.4	85.78
Os05t0541100-01	Rice	plastid	52.56	70.34
TraesCS1B01G379600.1	Wheat	mitochondrion	49.27	64.66
TraesCS1A01G362400.1	Wheat	mitochondrion	47.99	64.06
EES03502	Sorghum	mitochondrion	50.37	62.93
HORVU1Hr1G079590.12	Barley	cytosol	51.47	60.04
TraesCS1D01G367300.2	Wheat	mitochondrion, plastid	49.27	59.65
CDX72935	Canola	cytosol	19.78	41.06
OQU86150	Sorghum	cytosol	33.15	40.77
PGSC0003DMT400006376	Potato	cytosol	30.22	38.64
Solyc03g121760.2.1	Tomato	cytosol	30.22	38.46
Bra025971.1-P	Field mustard	nucleus	25.82	37.6
CDY26241	Canola	nucleus	25.82	37.6
AT1G72670.1	Thale cress	cytosol	28.39	37.44
CDY48305	Canola	nucleus	25.64	37.33
AT1G17480.1	Thale cress	cytosol	25.27	37.2
KRH23285	Soybean	nucleus	28.02	37.14
KRH10035	Soybean	cytosol	28.21	37.02
Bra016042.1-P	Field mustard	cytosol	27.84	36.89
KRH44124	Soybean	mitochondrion	25.82	33.49
KRH47099	Soybean	cytosol	26.37	31.24
KXG24027	Sorghum	cytosol	21.98	27.27
EER90769	Sorghum	mitochondrion	21.79	27.05
EER91163	Sorghum	cytosol	18.32	23.7
KXG21175	Sorghum	cytosol	20.33	23.47
KXG33651	Sorghum	cytosol	20.51	22.49
EER87873	Sorghum	nucleus	13.55	22.22
EES14418	Sorghum	cytosol	20.7	19.69
OQU78148	Sorghum	cytosol	17.03	16.61
EES01898	Sorghum	cytosol	15.75	15.28

Protein Annotations

EnsemblPlants:KXG22437	EnsemblPlantsGene:SORBI_3009G214500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF34	PFAM:PF00612	PFscan:PS50096	ProteinID:KXG22437
ProteinID:KXG22437.1	SEG:seg	SMART:SM00015	UniParc:UPI00081AC6C0	UniProt:A0A1B6P9Q7	MapMan:35.2

Description

hypothetical protein

Coordinates

chr9:+:55954925..55958218

Molecular Weight (calculated)

58989.1 Da

IEP (calculated)

11.838

GRAVY (calculated)

-0.614

Length

546 amino acids

Sequence
(BLAST)

001: MTCGPRAPRT ARQLGAPRIP RPGRHLCRLL LAAVRNLNPR GTRSTNRFVC SSPHRRGRKG QRLPPPPPPL LHWSFHFVAS RLASASSSPP PYPSADRGVP
101: PHNQSGSFGR AERVSCCAAP MGASGKWIKS LVAMKAPEKA AGHKGGRKWR LWRTSSAASR ASAGEGSALA SEASSASADS FSSVLAAVVR APPRDFLLIR
201: QEWAAVRIQT AFRAFLARRA LKALRGIVRL QALVRGRLVR KQLAVTLKCM HALLRVQERA RERRARSSAD GHGSQGQDAL NGRASSIKDA MEQWCDHQGS
301: VDDVRSKLHM KHEGAAKRER AIAYALSHQP RGSKHKGRPS SPASCVRSHE PNHDLSYLEG WMATKPWETR IMEGNHTDSQ LAKNCKEQNL PASKLSDASS
401: VKIRRNNVTT RVAAAKPPPP SLLSASSSDS VCDESSPSRS SVTLTSATNT ILASEARSDS GNNAGGPNYM SLTKSAKARL SGCSSSHRGS SFQRQRSGDM
501: SRVALSSIDT QSNAGSEISV TSRRLNSMSL KGSRSMPRSL DKENDV

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.