CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043691_P001	Maize	mitochondrion	90.16	89.75
TraesCS3A01G251400.1	Wheat	cytosol	76.66	77.73
TraesCS3B01G280900.1	Wheat	cytosol	76.43	77.67
Os01t0708700-01	Rice	cytosol	77.12	76.42
TraesCS3D01G251800.2	Wheat	cytosol	77.12	76.07
HORVU3Hr1G066840.2	Barley	cytosol	70.71	72.54
KXG22437	Sorghum	mitochondrion, plastid	62.93	50.37
OQU86150	Sorghum	cytosol	41.88	41.22
CDX72935	Canola	cytosol	24.71	41.06
Solyc03g121760.2.1	Tomato	cytosol	39.59	40.33
PGSC0003DMT400006376	Potato	cytosol	39.13	40.05
AT1G17480.1	Thale cress	cytosol	32.95	38.81
Bra025971.1-P	Field mustard	nucleus	32.49	37.87
CDY26241	Canola	nucleus	32.49	37.87
AT1G72670.1	Thale cress	cytosol	35.7	37.68
KRH10035	Soybean	cytosol	35.7	37.5
CDY48305	Canola	nucleus	32.04	37.33
Bra016042.1-P	Field mustard	cytosol	35.01	37.14
KRH23285	Soybean	nucleus	34.78	36.89
KRH44124	Soybean	mitochondrion	33.64	34.92
KRH47099	Soybean	cytosol	34.78	32.97
EER90769	Sorghum	mitochondrion	28.38	28.18
KXG24027	Sorghum	cytosol	27.23	27.05
EER91163	Sorghum	cytosol	24.49	25.36
EER87873	Sorghum	nucleus	18.08	23.72
KXG33651	Sorghum	cytosol	26.32	23.09
KXG21175	Sorghum	cytosol	24.26	22.41
EES14418	Sorghum	cytosol	25.86	19.69
OQU78148	Sorghum	cytosol	21.28	16.61
EES01898	Sorghum	cytosol	21.05	16.34

Protein Annotations

EnsemblPlants:EES03502	EnsemblPlantsGene:SORBI_3003G273800	EntrezGene:8069771	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF34	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	ProteinID:EES03502	ProteinID:EES03502.1	RefSeq:XP_002458382.1	SEG:seg
UniParc:UPI0001A84C14	UniProt:C5XHP0	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:61002654..61005502

Molecular Weight (calculated)

48091.4 Da

IEP (calculated)

11.724

GRAVY (calculated)

-0.713

Length

437 amino acids

Sequence
(BLAST)

001: MGASGKWIRT LVGLRPAAER ERPGAAGKGR KWSRLWRSSS SQRGSSAPPS EAPSEASSTV DALSSSVVAA VVRAQPRDFR VIRQEWAAVR IQSAFRAFLA
101: RRALRALRGI VRLQALVRGR RVRKQLAVTL KCMNALVRVQ ERARDRRFRI STDGRHSEDI LDDRSGHADP VKEAETGWCD SQGTVDDLRS KIQMRHEGAV
201: KRERAIAYAL SHQRSSSHSG RPSSPAVSLR NHGTSRSNHN WSYLDGSMAP KPWESRLMEQ THTEYSNNSR CSESIDEMNA VSSKLSDASS VKIRRNNITT
301: RVAARPPSTI SASSSDFVCD ASSPSTSSVT PVSGTSFLTS ERRSDYGHGG GPNYMNWTKS AKARLNGSST HKFPLQRQRS SDLHHISRTA LSSVDVQSTA
401: GSEVSVTSKR LNGLTLKGRG ARRSLDKKND DRPVAMF

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.