CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0619000-01	Rice	cytosol	71.82	71.49
Zm00001d031098_P004	Maize	cytosol	82.05	71.49
TraesCS5D01G037300.2	Wheat	nucleus	64.55	66.05
HORVU5Hr1G007780.1	Barley	cytosol	64.32	65.97
TraesCS5A01G029600.3	Wheat	nucleus	64.32	65.21
TraesCS5B01G028200.1	Wheat	nucleus	64.32	63.88
EER91163	Sorghum	cytosol	54.77	57.11
GSMUA_Achr4P31410_001	Banana	cytosol	49.55	49.55
GSMUA_Achr5P02600_001	Banana	cytosol	49.09	49.2
Bra031331.1-P	Field mustard	cytosol	42.5	48.7
CDY37387	Canola	cytosol	42.5	48.7
GSMUA_Achr4P22800_001	Banana	cytosol	46.14	46.77
VIT_06s0009g00210.t01	Wine grape	cytosol	46.82	46.29
CDY24286	Canola	cytosol	42.5	46.29
CDX92933	Canola	cytosol, plastid	42.05	46.13
CDY10618	Canola	cytosol	42.5	46.06
KRH26707	Soybean	cytosol	44.09	45.97
KRH22612	Soybean	cytosol	44.32	45.88
Solyc11g071840.1.1	Tomato	cytosol	45.68	44.87
AT3G22190.2	Thale cress	cytosol	42.95	44.79
KRH39086	Soybean	cytosol	42.73	43.32
EER90769	Sorghum	mitochondrion	42.5	42.5
CDY39505	Canola	cytosol	37.5	41.77
Bra001855.1-P	Field mustard	cytosol	32.05	41.11
CDX92931	Canola	mitochondrion, nucleus	23.41	40.39
CDY58749	Canola	cytosol	41.14	39.69
Bra023846.1-P	Field mustard	cytosol	36.59	38.61
CDY24282	Canola	mitochondrion	22.73	32.79
OQU86150	Sorghum	cytosol	30.68	30.41
EES03502	Sorghum	mitochondrion	27.05	27.23
EER87873	Sorghum	nucleus	18.64	24.62
KXG21175	Sorghum	cytosol	25.91	24.1
KXG33651	Sorghum	cytosol	25.68	22.69
KXG22437	Sorghum	mitochondrion, plastid	27.27	21.98
EES14418	Sorghum	cytosol	25.23	19.34
OQU78148	Sorghum	cytosol	20.23	15.89
EES01898	Sorghum	cytosol	19.55	15.28

Protein Annotations

EnsemblPlants:KXG24027	EnsemblPlantsGene:SORBI_3008G174900	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF23	PFAM:PF00612	PFscan:PS50096
ProteinID:KXG24027	ProteinID:KXG24027.1	ProteinID:OQU79651.1	SEG:seg	SMART:SM00015	UniParc:UPI00081ABEE7
UniProt:A0A1B6PEH4	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:60920854..60926838

Molecular Weight (calculated)

47669.2 Da

IEP (calculated)

10.697

GRAVY (calculated)

-0.746

Length

440 amino acids

Sequence
(BLAST)

001: MGISAKWIKS LVGIKKHEKG RNAECSDARS CVVQLLHKQE HSVNTESVPV AEELRVQAEP LAGDINTETI SNSASSPSTS LQVQISQTEL GTKEHQAIVA
101: IQSAFRAFLA RRALRALKGL VRLQALVRGH AVRKQAAETL QCMQALVRAQ ARVRARRVRV SLESQGTPKK PPEQNVHEDH VRDIEEDWCG SIGSVEEMKA
201: KALKRQEAAA KRERAMAYAL THQWQASSRK QKAASLQDQG LAGDENQWGQ KWLERWMAAR PWENRVLDSN AKDSVTVGND KPAEEDKAKA LNLNKPKGKV
301: PVSTTQSNGA GHKKSHSDIS GSSSGHSAVV QPTASLESSK IKVKPPNEIT DEVSSEPSNL ASRSTSNPKE RPVQVNAPAK KRLSLPNNAT ASGGVGKRPT
401: NSSRTTQASR LKNAKGASKS ETRDQPGPAN SAVKPVETLA

Best Arabidopsis Sequence Match ( AT3G22190.1 )
(BLAST)

001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA

Arabidopsis Description

IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.