CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034366_P003	Maize	mitochondrion	89.32	87.92
Os03t0787200-01	Rice	cytosol	68.41	71.33
Zm00001d013112_P011	Maize	mitochondrion	80.45	70.24
TraesCS5B01G427800.1	Wheat	cytosol, mitochondrion	65.23	66.74
TraesCS5A01G425800.1	Wheat	cytosol, mitochondrion	65.0	66.51
TraesCSU01G076200.1	Wheat	cytosol, mitochondrion	61.59	63.02
Bra031331.1-P	Field mustard	cytosol	43.86	50.26
CDY37387	Canola	cytosol	43.86	50.26
GSMUA_Achr4P31410_001	Banana	cytosol	50.0	50.0
GSMUA_Achr5P02600_001	Banana	cytosol	48.64	48.75
CDY10618	Canola	cytosol	44.77	48.52
CDY24286	Canola	cytosol	43.86	47.77
VIT_06s0009g00210.t01	Wine grape	cytosol	47.95	47.42
CDX92933	Canola	cytosol, plastid	43.18	47.38
KRH26707	Soybean	cytosol	45.23	47.16
KRH22612	Soybean	cytosol	45.45	47.06
AT3G22190.2	Thale cress	cytosol	44.32	46.21
GSMUA_Achr4P22800_001	Banana	cytosol	45.45	46.08
Solyc11g071840.1.1	Tomato	cytosol	45.68	44.87
KRH39086	Soybean	cytosol	43.18	43.78
CDY39505	Canola	cytosol	39.09	43.54
Bra001855.1-P	Field mustard	cytosol	33.64	43.15
CDY58749	Canola	cytosol	44.32	42.76
KXG24027	Sorghum	cytosol	42.5	42.5
CDX92931	Canola	mitochondrion, nucleus	24.32	41.96
Bra023846.1-P	Field mustard	cytosol	39.32	41.49
EER91163	Sorghum	cytosol	37.73	39.34
CDY24282	Canola	mitochondrion	26.14	37.7
OQU86150	Sorghum	cytosol	30.23	29.95
EES03502	Sorghum	mitochondrion	28.18	28.38
KXG21175	Sorghum	cytosol	25.91	24.1
EER87873	Sorghum	nucleus	18.18	24.02
KXG33651	Sorghum	cytosol	25.68	22.69
KXG22437	Sorghum	mitochondrion, plastid	27.05	21.79
EES14418	Sorghum	cytosol	23.86	18.29
EES01898	Sorghum	cytosol	19.55	15.28
OQU78148	Sorghum	cytosol	19.09	15.0

Protein Annotations

EnsemblPlants:EER90769	EnsemblPlantsGene:SORBI_3001G064600	EntrezGene:8083910	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF47	PFAM:PF00612	PFscan:PS50096
ProteinID:EER90769	ProteinID:EER90769.1	RefSeq:XP_002463771.1	SEG:seg	UniParc:UPI0001A821F6	UniProt:C5WY61
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:4888353..4893444

Molecular Weight (calculated)

49210.0 Da

IEP (calculated)

10.237

GRAVY (calculated)

-0.736

Length

440 amino acids

Sequence
(BLAST)

001: MGISARWLKS LVGLRKVERQ QQHRKEDADV GRMKGDVADQ FHFQNQRSQE DSSIAAQEEI PEVPYGNDPP EVDSNAPSCL EPTCDSAHVP LSQTEEELEE
101: IWAATIIQTA FRAFLARRAR RALKGLVRLQ ALVRGHIVRK QAATTLRCMQ ALVRVQARVR ARRVRMALEN QTDQQNTSPE HTIEARVREI EDGWCDSIGS
201: VEDIQAKLLK RQEAAAKRER AMAYALAHQW QASSRQAASF EPDKNSWGWN WLERWMAVRP WESRFLGTYA ADGIFVVNET RQPDISATKT PCRKPVKKHD
301: STLQSNTLNQ KVFPSNSEGG GSSTNRSSGS ASAKSRLKVL PREGAEEASS RPSVLVVRST SNPRERTSNI NSKERTGDLD CQVHKRFSLP GIGSEAGKHL
401: TKKGTVNRSL KATKDSQILG SRHHLASSID PVPTRVELET

Best Arabidopsis Sequence Match ( AT3G22190.1 )
(BLAST)

001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA

Arabidopsis Description

IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.