CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039471_P001	Maize	cytosol	93.92	92.67
Os01t0194200-01	Rice	cytosol	85.81	86.2
TraesCS3D01G107700.1	Wheat	cytosol	82.88	84.6
TraesCS3B01G124000.1	Wheat	cytosol	82.66	84.56
TraesCS3A01G105600.1	Wheat	cytosol, nucleus, peroxisome	81.53	82.65
HORVU3Hr1G019240.2	Barley	mitochondrion, peroxisome	80.41	72.12
Solyc08g062940.2.1	Tomato	cytosol	43.47	62.46
GSMUA_Achr6P04930_001	Banana	cytosol	56.76	62.07
GSMUA_Achr2P16650_001	Banana	nucleus	57.43	60.14
GSMUA_Achr7P09640_001	Banana	endoplasmic reticulum	54.5	58.74
VIT_04s0008g01080.t01	Wine grape	nucleus	56.98	56.35
GSMUA_Achr10P...	Banana	cytosol	53.15	55.79
PGSC0003DMT400021183	Potato	cytosol	52.25	53.46
KRH61522	Soybean	cytosol	54.05	53.33
Bra034294.1-P	Field mustard	nucleus	47.52	53.15
CDY35313	Canola	nucleus	47.52	53.15
AT2G26180.1	Thale cress	cytosol	49.55	52.88
CDX77034	Canola	cytosol	47.07	52.78
KRH15576	Soybean	cytosol	48.87	52.04
KRH52206	Soybean	cytosol	51.8	51.11
KRH05433	Soybean	cytosol	47.07	50.61
GSMUA_Achr2P15730_001	Banana	cytosol	48.42	48.75
EES03502	Sorghum	mitochondrion	41.22	41.88
KXG22437	Sorghum	mitochondrion, plastid	40.77	33.15
KXG24027	Sorghum	cytosol	30.41	30.68
EER90769	Sorghum	mitochondrion	29.95	30.23
EER87873	Sorghum	nucleus	20.72	27.63
EER91163	Sorghum	cytosol	25.68	27.01
KXG21175	Sorghum	cytosol	27.93	26.22
KXG33651	Sorghum	cytosol	27.7	24.7
EES14418	Sorghum	cytosol	26.8	20.73
EES01898	Sorghum	cytosol	21.85	17.23
OQU78148	Sorghum	cytosol	21.17	16.79

Protein Annotations

EnsemblPlants:OQU86150	EnsemblPlantsGene:SORBI_3003G032200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295
PANTHER:PTHR32295:SF88	PFAM:PF00612	PFscan:PS50096	ProteinID:OQU86150	ProteinID:OQU86150.1	SEG:seg
UniParc:UPI0009DC8BB5	UniProt:A0A1W0VVK2	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:2976380..2979353

Molecular Weight (calculated)

49374.8 Da

IEP (calculated)

11.019

GRAVY (calculated)

-0.678

Length

444 amino acids

Sequence
(BLAST)

001: MGGSGKWVKS LIGLKKPDKE DCCKEKLQFP SVHGGLRGKG RKWKLWRTSS GDQGSIWRGS RGGSQRSAAS EASDDASSVA APADPFTAAV ATVTRAPARD
101: FMAVRQEWAA IRIQTAFRGF LARRALRALK GLVRLQAIVR GRQVRKQAAV TLRCMQALVR VQARIRARRV RMSTEGQAVQ KLLEARRTQM DILREAEVEG
201: WCDSQGTLEQ VRVKLQKRQE GAIKRERAIA YAYSQQADGA AKCNPPKLTS NGRVNPSGML LKHQNFDKSN VNWSWLERWM AARPWENRLM EEHNQTNSSS
301: PDFRSSKNCE DSFGVLGDFS EPNSVKVRKN NVSKRVCAKP PGPTHAHGHH QRLKAQSISS LSTELHNDES SASSSSCFAS TPISFSTFVT SEKTEDNVRT
401: RPNYMSMTES IKAKQKACNA QRTVALKQSD DRKVMSAELM AAQV

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.