Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g062940.2.1 | Tomato | cytosol | 68.89 | 96.76 |
| VIT_04s0008g01080.t01 | Wine grape | nucleus | 72.12 | 69.71 |
| KRH61522 | Soybean | cytosol | 68.66 | 66.22 |
| KRH52206 | Soybean | cytosol | 66.59 | 64.22 |
| KRH05433 | Soybean | cytosol | 60.14 | 63.2 |
| KRH15576 | Soybean | cytosol | 60.6 | 63.07 |
| AT2G26180.1 | Thale cress | cytosol | 58.99 | 61.54 |
| Bra034294.1-P | Field mustard | nucleus | 55.07 | 60.2 |
| CDY35313 | Canola | nucleus | 55.07 | 60.2 |
| CDX77034 | Canola | cytosol | 54.61 | 59.85 |
| GSMUA_Achr6P04930_001 | Banana | cytosol | 51.38 | 54.93 |
| TraesCS3B01G124000.1 | Wheat | cytosol | 53.69 | 53.69 |
| TraesCS3D01G107700.1 | Wheat | cytosol | 53.46 | 53.33 |
| TraesCS3A01G105600.1 | Wheat | cytosol, nucleus, peroxisome | 53.0 | 52.51 |
| Os01t0194200-01 | Rice | cytosol | 53.23 | 52.26 |
| OQU86150 | Sorghum | cytosol | 53.46 | 52.25 |
| GSMUA_Achr2P16650_001 | Banana | nucleus | 50.23 | 51.42 |
| Zm00001d039471_P001 | Maize | cytosol | 53.23 | 51.33 |
| GSMUA_Achr7P09640_001 | Banana | endoplasmic reticulum | 48.39 | 50.97 |
| GSMUA_Achr10P... | Banana | cytosol | 48.85 | 50.12 |
| HORVU3Hr1G019240.2 | Barley | mitochondrion, peroxisome | 53.0 | 46.46 |
| GSMUA_Achr2P15730_001 | Banana | cytosol | 46.54 | 45.8 |
| PGSC0003DMT400006376 | Potato | cytosol | 42.17 | 42.86 |
| PGSC0003DMT400068456 | Potato | cytosol | 22.12 | 31.58 |
| PGSC0003DMT400010610 | Potato | nucleus | 31.11 | 29.35 |
| PGSC0003DMT400059119 | Potato | cytosol | 19.82 | 27.92 |
| PGSC0003DMT400039646 | Potato | mitochondrion | 18.66 | 27.36 |
| PGSC0003DMT400004433 | Potato | cytosol | 29.49 | 26.67 |
| PGSC0003DMT400023467 | Potato | nucleus | 28.57 | 26.44 |
| PGSC0003DMT400027139 | Potato | cytosol | 29.26 | 26.4 |
| PGSC0003DMT400045333 | Potato | cytosol | 26.96 | 24.84 |
| PGSC0003DMT400050471 | Potato | cytosol | 22.35 | 23.83 |
| PGSC0003DMT400031576 | Potato | nucleus | 25.35 | 22.18 |
| PGSC0003DMT400029325 | Potato | mitochondrion | 15.21 | 19.88 |
| PGSC0003DMT400041427 | Potato | cytosol | 22.58 | 18.32 |
| PGSC0003DMT400038175 | Potato | cytosol | 21.43 | 17.99 |
| PGSC0003DMT400042121 | Potato | cytosol, mitochondrion | 19.59 | 13.78 |
Protein Annotations
| Gene3D:1.20.5.190 | EntrezGene:102594459 | MapMan:35.1 | InterPro:DUF4005 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | UniProt:M1AER5 | PFAM:PF00612 | PFAM:PF13178 | EnsemblPlantsGene:PGSC0003DMG400008203 | PGSC:PGSC0003DMG400008203 |
| EnsemblPlants:PGSC0003DMT400021183 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF86 | SMART:SM00015 | UniParc:UPI000296C69B |
| RefSeq:XP_006351583.1 | SEG:seg | : | : | : | : |
Description
Calmodulin binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400008203]
Coordinates
chr8:+:35407283..35410723
Molecular Weight (calculated)
49183.6 Da
IEP (calculated)
10.658
GRAVY (calculated)
-0.797
Length
434 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASGKWVKA LIGFKKSEKE DHEKKVKKWK IWRSDVKGLK QRNGVGSEGS DCSSVNNDAY TAAVATVVRA PPKDFKAVRE EWAAIRIQTT FRGFLARRAF
101: RALKGLVRLQ ALVRGRQVRK QAAVTLRCMQ ALVRVQARVR ARRVRMSIEG QAVQKIIEEH RGKLDPMKEA EEGWCDSKRT LEEVKTKIHM RQEGVLKRER
201: ALAYSQAQKQ SKSSQNFDSR TTISVPSLKS LDYDKSNCGW SWLERWMAAR PWENRLMEQA YTDSLETTPK SKACLETLKD KNKTTSEPCS VKVKKNNVTK
301: RISAKPPLVG HTTRSSSSPS SEFRYDESSA ASSSFCTSTT PISGNTMLAS DRTDDSNSSR PNYMSLTEST KAKQRNQRML RQSMDEFQFL KLNNGDSKSC
401: AGYDPSVNFS RPLCLPTRMD KFSRLGDKQN CVFE
101: RALKGLVRLQ ALVRGRQVRK QAAVTLRCMQ ALVRVQARVR ARRVRMSIEG QAVQKIIEEH RGKLDPMKEA EEGWCDSKRT LEEVKTKIHM RQEGVLKRER
201: ALAYSQAQKQ SKSSQNFDSR TTISVPSLKS LDYDKSNCGW SWLERWMAAR PWENRLMEQA YTDSLETTPK SKACLETLKD KNKTTSEPCS VKVKKNNVTK
301: RISAKPPLVG HTTRSSSSPS SEFRYDESSA ASSSFCTSTT PISGNTMLAS DRTDDSNSSR PNYMSLTEST KAKQRNQRML RQSMDEFQFL KLNNGDSKSC
401: AGYDPSVNFS RPLCLPTRMD KFSRLGDKQN CVFE
001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG
Arabidopsis Description
IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.