Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g077260.2.1 | Tomato | nucleus | 89.61 | 91.39 |
| PGSC0003DMT400068456 | Potato | cytosol | 64.29 | 65.13 |
| VIT_10s0003g00860.t01 | Wine grape | cytosol, plastid | 52.92 | 53.27 |
| PGSC0003DMT400039646 | Potato | mitochondrion | 40.91 | 42.57 |
| PGSC0003DMT400021183 | Potato | cytosol | 27.92 | 19.82 |
| PGSC0003DMT400004433 | Potato | cytosol | 28.25 | 18.12 |
| PGSC0003DMT400010610 | Potato | nucleus | 26.95 | 18.04 |
| PGSC0003DMT400006376 | Potato | cytosol | 23.7 | 17.1 |
| PGSC0003DMT400045333 | Potato | cytosol | 25.97 | 16.99 |
| PGSC0003DMT400027139 | Potato | cytosol | 25.65 | 16.42 |
| PGSC0003DMT400023467 | Potato | nucleus | 24.03 | 15.78 |
| PGSC0003DMT400050471 | Potato | cytosol | 18.83 | 14.25 |
| PGSC0003DMT400041427 | Potato | cytosol | 21.43 | 12.34 |
| PGSC0003DMT400031576 | Potato | nucleus | 19.81 | 12.3 |
| PGSC0003DMT400042121 | Potato | cytosol, mitochondrion | 21.75 | 10.86 |
| PGSC0003DMT400029325 | Potato | mitochondrion | 11.69 | 10.84 |
| PGSC0003DMT400038175 | Potato | cytosol | 18.18 | 10.83 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400059119 | EnsemblPlantsGene:PGSC0003DMG400022965 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF9 | PFAM:PF00612 | PFscan:PS50096 | PGSC:PGSC0003DMG400022965 |
| SMART:SM00015 | UniParc:UPI000295F366 | UniProt:M1C3U3 | MapMan:35.1 | : | : |
Description
Calmodulin binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400022965]
Coordinates
chr2:-:32680930..32685784
Molecular Weight (calculated)
34636.9 Da
IEP (calculated)
11.310
GRAVY (calculated)
-0.790
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSAGWLKNV IGMRKAKDGR SKKIKGTSAN KKSNGCKGDN PLQKEPSKIT NGVLIKNQRE LGMPIEDRAA IKIQTAVRAF VARKTLRRLK GNTRLQSLTQ
101: HPSVKKQASS ALNYIGSWNT MQNEIRARRV HMVMEGHLKR KKHENQVKLE TKLQNIEIEW SGGPETMEVI LTRIHQREEA AIKRERAMAY AFSHQWRANS
201: NPVFGSGNNE MSKANWGWSW KDRWVAARPW ESRVLVHASP KKVNDKASKN TKSITSPIKK TPVSVILTSL NGKGTMKAKR SNEVAAQKVS SKVKEVSTEK
301: QEVVIEAN
101: HPSVKKQASS ALNYIGSWNT MQNEIRARRV HMVMEGHLKR KKHENQVKLE TKLQNIEIEW SGGPETMEVI LTRIHQREEA AIKRERAMAY AFSHQWRANS
201: NPVFGSGNNE MSKANWGWSW KDRWVAARPW ESRVLVHASP KKVNDKASKN TKSITSPIKK TPVSVILTSL NGKGTMKAKR SNEVAAQKVS SKVKEVSTEK
301: QEVVIEAN
001: MGSGWLLRSI ICLNGTKKNK SNRGNVHSET SNRVKPVESS SAASTKLTVE VAVIRIQKAF RAFKARKRLC SLKSARRFNS LIQGHTVMNQ TSTALNVIHS
101: WYDIQNQIRA RRLYMVTQGR LQHKRLENRL KLEIKLHELE VEWCGGSETM EEILAKIQQK EEATVKRERA MAYAFSHQWR ANATQYLGQA SFNLGKESWG
201: WSWKERWIAA RPWEIRAQCY VVKPIKPSKK PEKSSPNNVI TKTSAKPDEV GNSKKPGSG
101: WYDIQNQIRA RRLYMVTQGR LQHKRLENRL KLEIKLHELE VEWCGGSETM EEILAKIQQK EEATVKRERA MAYAFSHQWR ANATQYLGQA SFNLGKESWG
201: WSWKERWIAA RPWEIRAQCY VVKPIKPSKK PEKSSPNNVI TKTSAKPDEV GNSKKPGSG
Arabidopsis Description
IQD10IQ-domain 10 [Source:UniProtKB/TrEMBL;Acc:Q9LKA0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.