Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_19s0014g01690.t01 | Wine grape | cytosol | 59.48 | 58.9 |
| PGSC0003DMT400068456 | Potato | cytosol | 55.56 | 55.92 |
| Solyc10g008790.2.1 | Tomato | cytosol | 55.23 | 55.59 |
| Solyc02g077260.2.1 | Tomato | nucleus | 52.61 | 53.31 |
| PGSC0003DMT400059119 | Potato | cytosol | 53.27 | 52.92 |
| VIT_06s0009g00210.t01 | Wine grape | cytosol | 34.31 | 23.6 |
| VIT_04s0008g01080.t01 | Wine grape | nucleus | 33.01 | 22.49 |
| VIT_08s0040g02360.t01 | Wine grape | nucleus | 34.31 | 21.92 |
| VIT_13s0019g03890.t01 | Wine grape | cytosol | 33.99 | 21.58 |
| VIT_16s0098g01790.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 27.45 | 18.18 |
| VIT_02s0025g02690.t01 | Wine grape | mitochondrion, nucleus | 29.74 | 17.04 |
| VIT_15s0048g02680.t01 | Wine grape | nucleus | 27.12 | 14.9 |
| VIT_05s0094g00530.t01 | Wine grape | cytosol | 28.43 | 14.55 |
| VIT_16s0098g01070.t01 | Wine grape | mitochondrion, nucleus | 21.9 | 14.5 |
Protein Annotations
| EntrezGene:100258909 | wikigene:100258909 | MapMan:35.1 | ProteinID:CBI30653 | ProteinID:CBI30653.3 | UniProt:D7TJI1 |
| EMBL:FN595992 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0016020 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | EntrezGene:LOC100258909 | wikigene:LOC100258909 |
| PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF9 | UniParc:UPI00015CC9D3 | ArrayExpress:VIT_10s0003g00860 | EnsemblPlantsGene:VIT_10s0003g00860 |
| EnsemblPlants:VIT_10s0003g00860.t01 | unigene:Vvi.22359 | RefSeq:XP_002272018 | RefSeq:XP_002272018.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr10:+:2105059..2110917
Molecular Weight (calculated)
34320.1 Da
IEP (calculated)
11.248
GRAVY (calculated)
-0.827
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGDWFKAI LSSKKVKGDN SRKTKGTSTD AKSNGFKWRS RTLKGSTGFS YGSTSGNPGV LGIPVEDIAA TRIQTAFRAF MARKTLRRLK GIVRLQKLTQ
101: GDCVRKQAST TLSYLSSWSR IQTQIRARRL CMVTEGRIRQ KKLENQLKLD AKLHDLEVEW CGGPETMEEI LARIYHREEA AVKRERALAY AFSHQWRANS
201: GQNQGPNKSG LSKANWGWSW MERWIAARPW ESRVHISPKK AQSRQKNKVG KNIISPTTKV PVTVNPNGKG TTKARRLSYP SAEKPAARDG NIKPEEVNAK
301: EEQPGP
101: GDCVRKQAST TLSYLSSWSR IQTQIRARRL CMVTEGRIRQ KKLENQLKLD AKLHDLEVEW CGGPETMEEI LARIYHREEA AVKRERALAY AFSHQWRANS
201: GQNQGPNKSG LSKANWGWSW MERWIAARPW ESRVHISPKK AQSRQKNKVG KNIISPTTKV PVTVNPNGKG TTKARRLSYP SAEKPAARDG NIKPEEVNAK
301: EEQPGP
001: MGSGNLIKAI IRLKKSKQGT EKKKTSAVKP KKGSKKKGTS LVTRSEDWAA TRIQTAFKAY KARKSLRRLK GIARAKLSTE KQSVKNQAVV TLRYLHSWSK
101: IQSEIKARRV CMVTEWRLKN KRLEHQQKLE AKLHDVEVEW NGGSETKDEI LERILQREEA TIKRERALAY AFSHQWKADG KTQWLGSYEL GNTNWGWSWK
201: ERWISARPWE VRYSVTPKKP KSSKTDSNSP AKRTVSLSSV PAKTPFPGAR NTVKPRRLSF PGA
101: IQSEIKARRV CMVTEWRLKN KRLEHQQKLE AKLHDVEVEW NGGSETKDEI LERILQREEA TIKRERALAY AFSHQWKADG KTQWLGSYEL GNTNWGWSWK
201: ERWISARPWE VRYSVTPKKP KSSKTDSNSP AKRTVSLSSV PAKTPFPGAR NTVKPRRLSF PGA
Arabidopsis Description
iqd9IQ-domain 9 [Source:UniProtKB/TrEMBL;Acc:Q0WNP8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.