Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g121760.2.1 | Tomato | cytosol | 96.02 | 95.57 |
| CDX72935 | Canola | cytosol | 32.08 | 52.09 |
| AT1G72670.1 | Thale cress | cytosol | 44.96 | 46.38 |
| Bra016042.1-P | Field mustard | cytosol | 44.73 | 46.36 |
| AT1G17480.1 | Thale cress | cytosol | 39.11 | 45.01 |
| KRH44124 | Soybean | mitochondrion | 43.79 | 44.42 |
| Bra025971.1-P | Field mustard | nucleus | 38.88 | 44.27 |
| CDY26241 | Canola | nucleus | 38.88 | 44.27 |
| CDY48305 | Canola | nucleus | 38.41 | 43.73 |
| KRH10035 | Soybean | cytosol | 42.15 | 43.27 |
| KRH23285 | Soybean | nucleus | 41.69 | 43.2 |
| PGSC0003DMT400021183 | Potato | cytosol | 42.86 | 42.17 |
| KRH47099 | Soybean | cytosol | 44.5 | 41.21 |
| TraesCS3B01G280900.1 | Wheat | cytosol | 40.52 | 40.23 |
| TraesCS3A01G251400.1 | Wheat | cytosol | 40.52 | 40.14 |
| TraesCS3D01G251800.2 | Wheat | cytosol | 41.22 | 39.73 |
| Zm00001d043691_P001 | Maize | mitochondrion | 40.52 | 39.41 |
| Os05t0541100-01 | Rice | plastid | 37.47 | 39.22 |
| EES03502 | Sorghum | mitochondrion | 40.05 | 39.13 |
| Os01t0708700-01 | Rice | cytosol | 39.58 | 38.32 |
| Zm00001d038861_P001 | Maize | cytosol, plastid | 38.41 | 38.23 |
| HORVU3Hr1G066840.2 | Barley | cytosol | 36.53 | 36.62 |
| TraesCS1B01G379600.1 | Wheat | mitochondrion | 33.49 | 34.38 |
| TraesCS1A01G362400.1 | Wheat | mitochondrion | 32.08 | 33.5 |
| TraesCS1D01G367300.2 | Wheat | mitochondrion, plastid | 32.08 | 30.38 |
| HORVU1Hr1G079590.12 | Barley | cytosol | 33.26 | 30.34 |
| KXG22437 | Sorghum | mitochondrion, plastid | 38.64 | 30.22 |
| PGSC0003DMT400039646 | Potato | mitochondrion | 18.5 | 26.69 |
| PGSC0003DMT400068456 | Potato | cytosol | 17.8 | 25.0 |
| PGSC0003DMT400010610 | Potato | nucleus | 26.23 | 24.35 |
| PGSC0003DMT400059119 | Potato | cytosol | 17.1 | 23.7 |
| PGSC0003DMT400004433 | Potato | cytosol | 24.82 | 22.08 |
| PGSC0003DMT400023467 | Potato | nucleus | 24.12 | 21.96 |
| PGSC0003DMT400027139 | Potato | cytosol | 24.36 | 21.62 |
| PGSC0003DMT400045333 | Potato | cytosol | 23.42 | 21.23 |
| PGSC0003DMT400050471 | Potato | cytosol | 20.14 | 21.13 |
| PGSC0003DMT400031576 | Potato | nucleus | 22.25 | 19.15 |
| PGSC0003DMT400029325 | Potato | mitochondrion | 13.35 | 17.17 |
| PGSC0003DMT400038175 | Potato | cytosol | 19.91 | 16.44 |
| PGSC0003DMT400041427 | Potato | cytosol | 19.44 | 15.51 |
| PGSC0003DMT400042121 | Potato | cytosol, mitochondrion | 17.1 | 11.83 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400006376 | EnsemblPlantsGene:PGSC0003DMG400002492 | EntrezGene:102583360 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | InterPro:P-loop_NTPase | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF25 |
| PFAM:PF00612 | PFscan:PS50096 | PGSC:PGSC0003DMG400002492 | RefSeq:XP_006342967.1 | SEG:seg | SMART:SM00015 |
| SUPFAM:SSF52540 | UniParc:UPI0002961568 | UniProt:M0ZR85 | MapMan:35.2 | : | : |
Description
Calmodulin binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400002492]
Coordinates
chr3:-:61021938..61024716
Molecular Weight (calculated)
47578.1 Da
IEP (calculated)
10.563
GRAVY (calculated)
-0.764
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSGKWIKS LIGLKKNQSN DSEKGSGKNR KWKLWRSASG GIAMAFSKGV KGGGNLGDSD ESESSFLSDS ALAAAMATVI RAPHKDFVVV KQEWAALRIQ
101: AAFRGFLARR ALRALKAVVR LQAIFRGRQV RKQADVTLKC MQTLVKLQSR VRARCHQTSV DATQGSLVDS QADPIKQAEG GWCDSPGTVD EVRCKLKMRQ
201: VGAIKRERAI AYAQQKLRTN PSPNSRTRKV ETPNKFKANG DSVWLERWMA SKPWENRLVE DFHTDASGMT PSSRKYEDYD AGSFTDRSSV NIRRNNMSTR
301: ISTRGPMSCQ IANSSSEPYT DYYQYDDSTT SHSSISTSET LGSNQTPPEE GHSKKPNYMN LTKSIKAKVK QRNSNYLSHS MQRNSTDNLH VHRKSSPLSR
401: TIARRSADCD LYSVDLCKDL YPPSNAF
101: AAFRGFLARR ALRALKAVVR LQAIFRGRQV RKQADVTLKC MQTLVKLQSR VRARCHQTSV DATQGSLVDS QADPIKQAEG GWCDSPGTVD EVRCKLKMRQ
201: VGAIKRERAI AYAQQKLRTN PSPNSRTRKV ETPNKFKANG DSVWLERWMA SKPWENRLVE DFHTDASGMT PSSRKYEDYD AGSFTDRSSV NIRRNNMSTR
301: ISTRGPMSCQ IANSSSEPYT DYYQYDDSTT SHSSISTSET LGSNQTPPEE GHSKKPNYMN LTKSIKAKVK QRNSNYLSHS MQRNSTDNLH VHRKSSPLSR
401: TIARRSADCD LYSVDLCKDL YPPSNAF
001: MGGSGNWIKS LITNKKNITD DQEKNIKKKW KLWRTSSEGL ISSSKGFKSR GGSYGTPSLG SDPPSFSADD SFTAAVAAVI RAPPKDFFLV KREWAATRIQ
101: AAFRAFLARQ ALRALKAVVR IQAIFRGRQV RKQADVTLRC MQALVRVQAR VRAHCNRGPS DGQELEKPSD QQKDDPAKQA EKGWCDSPGS INEVRTKLQM
201: RQEGAIKRER AMVYALTHQP RTCPSPAKAS KQGSVKKNNG SCKSSPGWNW LDRWVADRPW EGRLMEGPTN SSENARKSES SVSEHDTVQV RKNNLTTRVL
301: ARPPPMSSSA TSSESSSTSQ SPVPFSGSFL EEGGYYRKPS YMSLTQSIKA KQRRSGSSSS CSKTPFEKKQ SMSYNGDVNV RRSAGSDPLN NQWTDLYPPA
401: QVTGRHMWAK SQRG
101: AAFRAFLARQ ALRALKAVVR IQAIFRGRQV RKQADVTLRC MQALVRVQAR VRAHCNRGPS DGQELEKPSD QQKDDPAKQA EKGWCDSPGS INEVRTKLQM
201: RQEGAIKRER AMVYALTHQP RTCPSPAKAS KQGSVKKNNG SCKSSPGWNW LDRWVADRPW EGRLMEGPTN SSENARKSES SVSEHDTVQV RKNNLTTRVL
301: ARPPPMSSSA TSSESSSTSQ SPVPFSGSFL EEGGYYRKPS YMSLTQSIKA KQRRSGSSSS CSKTPFEKKQ SMSYNGDVNV RRSAGSDPLN NQWTDLYPPA
401: QVTGRHMWAK SQRG
Arabidopsis Description
iqd8At1g72670 [Source:UniProtKB/TrEMBL;Acc:Q9CAI2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.