Factsheet for Zm00001d043691_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03502	Sorghum	mitochondrion	89.75	90.16
Os01t0708700-01	Rice	cytosol	75.4	75.06
TraesCS3A01G251400.1	Wheat	cytosol	72.67	74.01
TraesCS3B01G280900.1	Wheat	cytosol	72.44	73.95
TraesCS3D01G251800.2	Wheat	cytosol	73.12	72.46
HORVU3Hr1G066840.2	Barley	cytosol	66.97	69.01
Zm00001d038861_P001	Maize	cytosol, plastid	58.77	60.14
CDX72935	Canola	cytosol	24.37	40.68
Solyc03g121760.2.1	Tomato	cytosol	39.64	40.56
PGSC0003DMT400006376	Potato	cytosol	39.41	40.52
Zm00001d039471_P001	Maize	cytosol	40.32	39.33
AT1G17480.1	Thale cress	cytosol	32.35	38.27
Bra025971.1-P	Field mustard	nucleus	32.35	37.87
CDY26241	Canola	nucleus	32.35	37.87
AT1G72670.1	Thale cress	cytosol	35.08	37.2
CDY48305	Canola	nucleus	31.66	37.07
KRH10035	Soybean	cytosol	35.08	37.02
Bra016042.1-P	Field mustard	cytosol	34.4	36.65
KRH23285	Soybean	nucleus	34.17	36.41
KRH44124	Soybean	mitochondrion	33.03	34.44
KRH47099	Soybean	cytosol	33.71	32.1
Zm00001d034366_P003	Maize	mitochondrion	26.42	25.95
Zm00001d033211_P002	Maize	cytosol	24.15	24.71
Zm00001d031098_P004	Maize	cytosol	27.56	23.96
Zm00001d013112_P011	Maize	mitochondrion	27.11	23.61
Zm00001d010975_P003	Maize	cytosol	24.83	22.8
Zm00001d035492_P009	Maize	cytosol	24.15	22.27
Zm00001d042973_P007	Maize	cytosol	25.28	21.89
Zm00001d045305_P001	Maize	nucleus	16.63	21.79
Zm00001d049684_P002	Maize	cytosol, mitochondrion	25.28	20.4
Zm00001d009320_P001	Maize	nucleus	9.34	17.75
Zm00001d012167_P001	Maize	cytosol	20.5	15.57
Zm00001d038395_P005	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.18	14.31

Protein Annotations

EnsemblPlants:Zm00001d043691_P001	EnsemblPlants:Zm00001d043691_T001	EnsemblPlantsGene:Zm00001d043691	EntrezGene:103651273	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295	PANTHER:PTHR32295:SF34
PFAM:PF00612	PFscan:PS50096	ProteinID:ONM38831.1	SEG:seg	SUPFAM:SSF52540	UniParc:UPI000221728F
UniProt:A0A1D6NEB9	MapMan:35.2	:	:	:	:

Description

IQ-domain 6

Coordinates

chr3:+:207541295..207543989

Molecular Weight (calculated)

48147.6 Da

IEP (calculated)

11.839

GRAVY (calculated)

-0.688

Length

439 amino acids

Sequence
(BLAST)

001: MGASGKWIRT LVGLRPAAER ERPGAVAKGR KWSRLWRSSS SQRGSSAPAS EAPSEASSTA DMLSSSVVAA VVRAQPRDFR VIRQEWAAVR IQSAFRAFLA
101: RRALRALRGI VRLQALVRGR HVRKQLSVTL KCMNALVRVQ ERARERRFRI SADGRHSQDI LDDRSGLADP VKEAEAGWCD SQGTVDDLRS KMHMRHEGAV
201: KRERAIAYAL SHQRSSSHSG RPSSPAASLR NHGTGRSNKD WSHLDGSMAT KPWESRLMEQ THTEHSNNSR CSESIEEMNA ASSKLSDASS VKVRRNNMTT
301: RVAAARPPPS TISASSSDFV CDASCSPSTS SVTPAASGTS FLTSDRRSDY GPNYMNWTKS AKARLNGSGT AHRLPLQRQR SSDLHHRISR IALSSADAQS
401: TAGSEVSVTS KRLNSLTLRG RGARRSLDRK NDDQPVALF

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.