Factsheet for Zm00001d042973_P007

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004812_P002
Zm00001d017793_P001
Zm00001d023560_P002
Zm00001d051589_P001
Zm00001d053016_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03040.1	Zm00001d017793_P001	AT3G27960.1	21798944
AT5G03040.1	Zm00001d051589_P001	AT3G27960.1	21798944
AT5G03040.1	Zm00001d004812_P002	AT4G09570.1	19130088
AT5G03040.1	Zm00001d023560_P002	AT4G09570.1	19130088
AT5G03040.1	Zm00001d053016_P002	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33651	Sorghum	cytosol	91.12	92.77
Os01t0833800-01	Rice	plasma membrane	80.28	81.4
TraesCS3D01G346500.1	Wheat	cytosol	77.51	78.76
TraesCS3B01G385100.1	Wheat	cytosol	77.32	78.56
TraesCS3A01G352500.1	Wheat	cytosol	77.12	78.36
HORVU3Hr1G087500.2	Barley	cytosol	77.12	78.36
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	49.11	54.25
GSMUA_Achr7P22680_001	Banana	cytosol	48.32	52.69
PGSC0003DMT400004433	Potato	cytosol	48.32	51.04
Solyc10g084280.1.1	Tomato	nucleus	47.14	50.0
Solyc09g007410.2.1	Tomato	cytosol	47.53	49.9
PGSC0003DMT400027139	Potato	cytosol	47.14	49.69
GSMUA_Achr10P...	Banana	cytosol	41.22	49.53
VIT_08s0040g02360.t01	Wine grape	nucleus	46.35	49.06
PGSC0003DMT400045333	Potato	cytosol	44.58	47.98
Solyc10g086060.1.1	Tomato	cytosol	44.18	47.56
Zm00001d035492_P009	Maize	cytosol	44.18	47.06
Zm00001d010975_P003	Maize	cytosol	43.0	45.61
KRG95941	Soybean	nucleus	42.8	45.49
GSMUA_Achr11P...	Banana	mitochondrion	41.42	45.45
KRH67648	Soybean	nucleus	42.41	45.07
CDY11238	Canola	cytosol, plastid	36.49	44.79
KRH32420	Soybean	cytosol	41.81	44.73
KRH19825	Soybean	cytosol	40.63	43.83
CDX80849	Canola	cytosol, plastid	35.9	42.72
CDY10410	Canola	cytosol, plastid	36.09	41.22
AT5G03040.1	Thale cress	cytosol, plastid	37.08	40.78
CDY04876	Canola	nucleus, plastid	35.7	40.67
CDY55696	Canola	nucleus, plastid	34.91	40.5
Bra028854.1-P	Field mustard	nucleus, plastid	35.31	40.22
CDX70333	Canola	cytosol	35.5	37.5
Bra009554.1-P	Field mustard	cytosol	34.52	37.16
AT3G09710.2	Thale cress	nucleus	32.74	35.47
Bra034081.1-P	Field mustard	nucleus	28.8	32.88
Zm00001d045305_P001	Maize	nucleus	19.33	29.25
Bra001299.1-P	Field mustard	nucleus	27.22	29.18
CDX73992	Canola	nucleus	26.82	28.51
Zm00001d039471_P001	Maize	cytosol	25.25	28.44
CDY07937	Canola	nucleus	26.43	28.03
Zm00001d038395_P005	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	35.9	28.0
CDY22198	Canola	cytosol	30.77	27.91
CDY41307	Canola	cytosol	29.59	27.42
Zm00001d049684_P002	Maize	cytosol, mitochondrion	28.4	26.47
Zm00001d038861_P001	Maize	cytosol, plastid	22.29	26.34
Zm00001d043691_P001	Maize	mitochondrion	21.89	25.28
Zm00001d034366_P003	Maize	mitochondrion	22.29	25.28
Zm00001d033211_P002	Maize	cytosol	20.12	23.78
Zm00001d009320_P001	Maize	nucleus	10.26	22.51
Zm00001d031098_P004	Maize	cytosol	22.29	22.38
Zm00001d013112_P011	Maize	mitochondrion	21.7	21.83
Zm00001d012167_P001	Maize	cytosol	24.65	21.63

Protein Annotations

EnsemblPlants:Zm00001d042973_P007	EnsemblPlants:Zm00001d042973_T007	EnsemblPlantsGene:Zm00001d042973	EntrezGene:100273111	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF28
PFAM:PF00612	PFscan:PS50096	ProteinID:ONM36638.1	ProteinID:ONM36643.1	SEG:seg	SMART:SM00015
UniParc:UPI0008455587	UniProt:A0A1D6N7T2	MapMan:35.1	:	:	:

Description

IQ-domain 3

Coordinates

chr3:+:185491369..185495066

Molecular Weight (calculated)

56176.8 Da

IEP (calculated)

11.030

GRAVY (calculated)

-0.756

Length

507 amino acids

Sequence
(BLAST)

001: MGKRGKWFSA VKKVFSSSDP DGKEAKAQKA DKSKSKRRWP FGKSKHSEPS ISTVPGTAPA VAPLPSPPAT QPHSLEIKDV NPVETDSEQN KHAYSVALAS
101: AVAAEAAAVA AQAAAEVVRL TAVTTAAPKM PVSSREELAA TKIQTAFRGY LARRALRALR GLVRLKSLVD GNAVKRQTAH TLQCTQAMTR VQTQIYSRRV
201: KLEEEKQALQ RQLQLKHQRE LEKMKIDEDW DHSHQSKEQI EANLMMKQEA ALRRERALAY AFSHQASCPF CFCGWRNSGR TITPTFTEPG NPNWGWSWME
301: RWMTARPWES RLAAASDKDP KERAVTKNAS TSAVRVPVSR AISIQRPATP NKSSRPPSRQ SLSTPPSKTP SASGKARPAS PRNSWLYKED DLRSITSIRS
401: ERPRRQSTGG GSVRDDTSLT STPPLPSYMQ STESARAKSR YRSLLLTEKL EVPERAPLAH SVVKKRLSFP VVEKPSVVPT EKPRERVRRH SDPPKVDPAT
501: LKDAPAA

Best Arabidopsis Sequence Match ( AT3G09710.1 )
(BLAST)

001: MVKKAKWLKN VKKAFSPDSK KLKHESVECQ DSVISYPVLI ATSRSSSPQF EVRVDEVNYE QKKNLYPPSS DSVTATVAHV LVDSPPSSPE SVHQAIVVNR
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP

Arabidopsis Description

IQD1IQ-domain 1 [Source:UniProtKB/TrEMBL;Acc:F4J1A4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.