Factsheet for Zm00001d049684_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14418	Sorghum	cytosol	88.05	83.45
Os08t0115200-01	Rice	cytosol	78.68	78.82
TraesCS7A01G317400.2	Wheat	nucleus	77.39	77.39
HORVU7Hr1G075720.1	Barley	plasma membrane	77.39	77.11
TraesCS7B01G218800.3	Wheat	nucleus	77.21	77.06
TraesCSU01G104800.3	Wheat	nucleus	76.65	76.51
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	57.54	67.9
GSMUA_Achr1P18950_001	Banana	nucleus	56.99	67.69
GSMUA_Achr1P16160_001	Banana	nucleus	54.96	66.74
Solyc10g005000.2.1	Tomato	nucleus	38.05	52.54
VIT_15s0048g02680.t01	Wine grape	nucleus	53.68	52.42
KRH47821	Soybean	nucleus	51.84	51.65
KRH06386	Soybean	mitochondrion, nucleus	52.21	51.64
PGSC0003DMT400029325	Potato	mitochondrion	31.07	50.9
VIT_02s0025g02690.t01	Wine grape	mitochondrion, nucleus	48.35	49.25
VIT_16s0098g01070.t01	Wine grape	mitochondrion, nucleus	40.99	48.27
Solyc08g083240.2.1	Tomato	nucleus	43.2	48.06
CDY15200	Canola	nucleus	45.04	47.95
AT4G00820.1	Thale cress	mitochondrion, nucleus	47.06	47.94
CDX90011	Canola	nucleus	44.67	47.83
PGSC0003DMT400031576	Potato	nucleus	43.57	47.78
Bra033284.1-P	Field mustard	nucleus	44.67	46.2
CDY69140	Canola	mitochondrion, nucleus	44.3	45.9
CDX91859	Canola	mitochondrion, nucleus	44.49	45.66
Bra000930.1-P	Field mustard	mitochondrion, nucleus	43.75	45.33
AT1G01110.2	Thale cress	nucleus	43.75	45.16
CDY05111	Canola	nucleus	35.11	44.52
Bra000717.1-P	Field mustard	nucleus	35.29	44.44
CDX90766	Canola	nucleus	35.11	44.32
AT4G10640.1	Thale cress	nucleus	33.46	43.03
Solyc01g009340.2.1	Tomato	nucleus	26.47	35.73
PGSC0003DMT400038175	Potato	cytosol	32.72	34.43
CDY08131	Canola	nucleus	21.32	33.72
Bra017988.1-P	Field mustard	nucleus	21.51	33.43
CDY05931	Canola	nucleus	21.32	32.95
AT3G49380.1	Thale cress	nucleus	20.96	32.39
Zm00001d010975_P003	Maize	cytosol	25.74	29.29
Zm00001d035492_P009	Maize	cytosol	25.55	29.2
Zm00001d042973_P007	Maize	cytosol	26.47	28.4
Zm00001d039471_P001	Maize	cytosol	21.69	26.22
Zm00001d038861_P001	Maize	cytosol, plastid	20.4	25.87
Zm00001d043691_P001	Maize	mitochondrion	20.4	25.28
Zm00001d045305_P001	Maize	nucleus	13.79	22.39
Zm00001d034366_P003	Maize	mitochondrion	18.2	22.15
Zm00001d033211_P002	Maize	cytosol	17.46	22.14
Zm00001d012167_P001	Maize	cytosol	22.79	21.45
Zm00001d031098_P004	Maize	cytosol	19.67	21.19
Zm00001d013112_P011	Maize	mitochondrion	18.38	19.84
Zm00001d038395_P005	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.4	17.08
Zm00001d009320_P001	Maize	nucleus	6.99	16.45

Protein Annotations

EnsemblPlants:Zm00001d049684_P002	EnsemblPlants:Zm00001d049684_T002	EnsemblPlantsGene:Zm00001d049684	EntrezGene:100501224	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF0
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:AQK51063.1	SEG:seg	SMART:SM00015
UniParc:UPI000221F9A6	UniProt:K7TTZ5	MapMan:35.2	:	:	:

Description

IQ-domain 18

Coordinates

chr4:-:39985603..39987836

Molecular Weight (calculated)

58954.1 Da

IEP (calculated)

11.642

GRAVY (calculated)

-0.728

Length

544 amino acids

Sequence
(BLAST)

001: MGKKAWLTAV KRAFRSPSKD DSSSPARKAS RLREDADGED DKGKRERRRW LFRRSSSPSP APAPPAPAPA AVTEEQRHAI ALAVATAATA EAAVATAQAA
101: AEVVRLTRPG GHAAAPSFAR RDHHAAVAIQ TAFRGYLARR ALRALRGLVK LQALVRGHNV RKQANMTLRC MQALVRVQAR VRDRRMRLSQ ESVLSMSGGG
201: GGAGAAPCGS SKSSYSVDTS AFWDPKYAHD YADRRSVERS RDGSSFAADD WDDRPRTIEE IQAMLQTRKD AALKRERALS YAFSHQIRRN PAAPSADMDV
301: DVDVDGQPRW AERWMASRAS FDTSRSSVRG AAAAAPGRAS MEQHREPVKT LEMDTARPFS YSTPRRHAGA SSPMHRAQQN QHHPAVATPS PVKARPPIQV
401: RSASPRVDHH HRGTGGGGGS YTPSLLHSQR HAAAVPNYMA ATESAKARVR SQSAPRQRPA TPERERDRGA KKRLSFPAQL QHQVLAAEYA QSLRSPSFKS
501: AAGRFSSEQR STVSSSCADS LGGGCGGDVG SPSSSAADLR RWLR

Best Arabidopsis Sequence Match ( AT4G00820.1 )
(BLAST)

001: MGKKSGSSSS WLTAVKRAFR SPTKKEHNNN AHGNEVDEDE DKKKEKRRWL FRKSTNHDSP VKTSGVGKDA PAQKSTETTT IINPTVLSSV TEQRYDASTP
101: PATVSAASET HPPSTTKELP NLTRRTYTAR EDYAAVVIQT GFRGYLARRA LRALKGLVKL QALVRGHNVR KQAKMTLRCM QALVRVQSRV LDQRKRLSHD
201: GSRKSAFSDT QSVLESRYLQ EISDRRSMSR EGSSIAEDWD DRPHTIEEVK AMLQQRRDNA LRRESNNSIS QAFSHQVRRT RGSYSTGDEY EEERPKWLDR
301: WMASKPWDKR ASTDQRVPPV YKTVEIDTSQ PYLTRGNSRT GASPSRSQRP SSPSRTSHHY QQHNFSSATP SPAKSRPIQI RSASPRIQRD DRSAYNYTSN
401: TPSLRSNYSF TARSGYSVCT TTTTATNAAL PNYMAITESA KARIRSQSAP RQRPSTPEKE RISSARKRLS FPVPPLPQQM DGQSLRSPSF KSIGGSQLGA
501: LEQQSNYSSC CTESLGGGGE ISPASTSDYR RWLR

Arabidopsis Description

iqd17IQ-domain 17 [Source:UniProtKB/TrEMBL;Acc:F4JHN2]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.