Factsheet for TraesCS7A01G317400.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
cytosol 1
plastid 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G075720.1	Barley	plasma membrane	98.9	98.53
TraesCSU01G104800.3	Wheat	nucleus	98.71	98.53
TraesCS7B01G218800.3	Wheat	nucleus	98.53	98.35
Os08t0115200-01	Rice	cytosol	84.56	84.71
Zm00001d049684_P002	Maize	cytosol, mitochondrion	77.39	77.39
EES14418	Sorghum	cytosol	81.62	77.35
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	61.95	73.1
GSMUA_Achr1P18950_001	Banana	nucleus	61.03	72.49
GSMUA_Achr1P16160_001	Banana	nucleus	57.35	69.64
Solyc10g005000.2.1	Tomato	nucleus	41.36	57.11
VIT_15s0048g02680.t01	Wine grape	nucleus	57.9	56.55
PGSC0003DMT400029325	Potato	mitochondrion	33.64	55.12
KRH47821	Soybean	nucleus	55.15	54.95
KRH06386	Soybean	mitochondrion, nucleus	55.15	54.55
VIT_02s0025g02690.t01	Wine grape	mitochondrion, nucleus	52.94	53.93
VIT_16s0098g01070.t01	Wine grape	mitochondrion, nucleus	44.85	52.81
CDY15200	Canola	nucleus	48.35	51.47
AT4G00820.1	Thale cress	mitochondrion, nucleus	50.37	51.31
CDX90011	Canola	nucleus	47.79	51.18
Bra033284.1-P	Field mustard	nucleus	48.71	50.38
AT1G01110.2	Thale cress	nucleus	48.35	49.91
CDY69140	Canola	mitochondrion, nucleus	47.43	49.14
CDX91859	Canola	mitochondrion, nucleus	47.79	49.06
PGSC0003DMT400031576	Potato	nucleus	44.3	48.59
Solyc08g083240.2.1	Tomato	nucleus	43.57	48.47
Bra000930.1-P	Field mustard	mitochondrion, nucleus	46.14	47.81
CDY05111	Canola	nucleus	35.48	44.99
Bra000717.1-P	Field mustard	nucleus	35.66	44.91
CDX90766	Canola	nucleus	35.48	44.78
AT4G10640.1	Thale cress	nucleus	33.27	42.79
Solyc01g009340.2.1	Tomato	nucleus	28.12	37.97
CDY08131	Canola	nucleus	23.16	36.63
PGSC0003DMT400038175	Potato	cytosol	34.74	36.56
Bra017988.1-P	Field mustard	nucleus	23.35	36.29
CDY05931	Canola	nucleus	23.35	36.08
AT3G49380.1	Thale cress	nucleus	22.43	34.66
TraesCS1A01G064100.1	Wheat	cytosol	27.21	30.83
TraesCS3A01G352500.1	Wheat	cytosol	27.39	29.86
TraesCS3A01G538100.1	Wheat	cytosol, mitochondrion	27.39	28.06
TraesCS3A01G105600.1	Wheat	cytosol, nucleus, peroxisome	21.88	27.17
TraesCS3A01G251400.1	Wheat	cytosol	21.14	26.68
TraesCS5A01G425800.1	Wheat	cytosol, mitochondrion	19.67	24.88
TraesCS1A01G362400.1	Wheat	mitochondrion	18.38	24.45
TraesCS5A01G029600.3	Wheat	nucleus	18.93	23.73
TraesCS7A01G112000.1	Wheat	nucleus	13.97	23.24
TraesCS1A01G288100.2	Wheat	nucleus	22.24	23.22
TraesCS5A01G373000.1	Wheat	nucleus	17.46	21.79
TraesCS3A01G398900.1	Wheat	cytosol	21.88	19.1

Protein Annotations

EnsemblPlants:TraesCS7A01G317400.2	EnsemblPlantsGene:TraesCS7A01G317400	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF0	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	MapMan:35.2	:

Description

No Description!

Coordinates

chr7A:+:457568891..457570934

Molecular Weight (calculated)

59228.0 Da

IEP (calculated)

11.295

GRAVY (calculated)

-0.787

Length

544 amino acids

Sequence
(BLAST)

001: MGNKKGGSSW LTAVKRAFRS PSKEDSPKKS ARLREDPDAD EDKTKRERRR WLFRRSSSPS PSPASAPAPP EQQQSAARSA PAPAVTDEQR HAIALAVATA
101: ATAEAAVATA QAAAEVVRLT RPSSFVREHY AAIVVQTAFR GYLARRALRA LKGLVKLQAL VRGHNVRKQA NMTLRCMQAL VRVQARVRDQ RMRLSQESLS
201: AAGAAACGSS KSSYSVDTSA FWDSKYTQEY AERRSVERSR DGSSFAAEDW DDRPRTIEEI QAMLQTRKDA ALKRERALSY AFSHQIWRNP APSVEEEMDV
301: DGQPRWAERW MASRASFDTN RSSARTAAAA AAAAPGRAST DHRDQVKTLE IDTARPFSYS TPRRHAPPSQ HGSGSPMHRA HHQASVTPSP GKARPPIQVR
401: SASPRVERGT GGGGGSYTPS LHSQRHASSG SAVPNYMAAT ESAKARIRSQ SAPRQRPATP ERDRPQTAYN PAGGSAKKRL SFPVPQDPYG VGYAQSLRSP
501: SFKSATGRFT SEQRSTVSSL SCAESVGGEP VSPSSTTDLS RWLR

Best Arabidopsis Sequence Match ( AT4G00820.1 )
(BLAST)

001: MGKKSGSSSS WLTAVKRAFR SPTKKEHNNN AHGNEVDEDE DKKKEKRRWL FRKSTNHDSP VKTSGVGKDA PAQKSTETTT IINPTVLSSV TEQRYDASTP
101: PATVSAASET HPPSTTKELP NLTRRTYTAR EDYAAVVIQT GFRGYLARRA LRALKGLVKL QALVRGHNVR KQAKMTLRCM QALVRVQSRV LDQRKRLSHD
201: GSRKSAFSDT QSVLESRYLQ EISDRRSMSR EGSSIAEDWD DRPHTIEEVK AMLQQRRDNA LRRESNNSIS QAFSHQVRRT RGSYSTGDEY EEERPKWLDR
301: WMASKPWDKR ASTDQRVPPV YKTVEIDTSQ PYLTRGNSRT GASPSRSQRP SSPSRTSHHY QQHNFSSATP SPAKSRPIQI RSASPRIQRD DRSAYNYTSN
401: TPSLRSNYSF TARSGYSVCT TTTTATNAAL PNYMAITESA KARIRSQSAP RQRPSTPEKE RISSARKRLS FPVPPLPQQM DGQSLRSPSF KSIGGSQLGA
501: LEQQSNYSSC CTESLGGGGE ISPASTSDYR RWLR

Arabidopsis Description

iqd17IQ-domain 17 [Source:UniProtKB/TrEMBL;Acc:F4JHN2]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.