Factsheet for AT4G10640.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90766	Canola	nucleus	80.14	78.65
CDY05111	Canola	nucleus	79.67	78.55
Bra000717.1-P	Field mustard	nucleus	80.14	78.47
GSMUA_Achr6P02050_001	Banana	cytosol	15.37	41.94
PGSC0003DMT400031576	Potato	nucleus	45.86	39.11
Solyc08g083240.2.1	Tomato	nucleus	45.15	39.06
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	41.13	37.74
VIT_02s0025g02690.t01	Wine grape	mitochondrion, nucleus	47.52	37.64
GSMUA_Achr1P16160_001	Banana	nucleus	39.24	37.05
GSMUA_Achr1P18950_001	Banana	nucleus	39.95	36.9
Os08t0115200-01	Rice	cytosol	43.97	34.25
AT4G00820.1	Thale cress	mitochondrion, nucleus	43.03	34.08
Zm00001d049684_P002	Maize	cytosol, mitochondrion	43.03	33.46
TraesCSU01G104800.3	Wheat	nucleus	43.03	33.39
TraesCS7B01G218800.3	Wheat	nucleus	43.03	33.39
TraesCS7A01G317400.2	Wheat	nucleus	42.79	33.27
HORVU7Hr1G075720.1	Barley	plasma membrane	42.79	33.15
AT1G01110.2	Thale cress	nucleus	41.13	33.02
EES14418	Sorghum	cytosol	44.68	32.93
AT3G49380.1	Thale cress	nucleus	22.22	26.7
AT3G52290.1	Thale cress	cytosol	26.71	26.28
AT2G26180.1	Thale cress	cytosol	24.59	25.0
AT2G33990.1	Thale cress	cytosol	14.66	23.57
AT3G22190.2	Thale cress	cytosol	22.93	22.99
AT5G03040.1	Thale cress	cytosol, plastid	24.35	22.34
AT1G72670.1	Thale cress	cytosol	21.51	21.98
AT1G17480.1	Thale cress	cytosol	19.15	21.83
AT3G15050.1	Thale cress	plastid	13.0	21.24
AT3G49260.3	Thale cress	nucleus	21.51	19.28
AT3G59690.2	Thale cress	nucleus	23.4	19.15
AT3G09710.2	Thale cress	nucleus	20.8	18.8
AT2G26410.2	Thale cress	cytosol	20.8	16.7
AT2G43680.1	Thale cress	nucleus	22.46	14.2

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	EntrezGene:826656	ProteinID:AEE82912.1	EMBL:AK228338	ArrayExpress:AT4G10640
EnsemblPlantsGene:AT4G10640	RefSeq:AT4G10640	TAIR:AT4G10640	RefSeq:AT4G10640-TAIR-G	EnsemblPlants:AT4G10640.1	TAIR:AT4G10640.1
Unigene:At.33616	EMBL:BT010145	ncoils:Coil	InterPro:DUF4005	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005516	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	InterPro:IPR000048	Symbol:IQD16	InterPro:IQ_motif_EF-hand-BS	RefSeq:NP_192802.2
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF50	UniProt:Q7XA83
SMART:SM00015	UniParc:UPI00001B98EB	SEG:seg	:	:	:

Description

IQD16At4g10640 [Source:UniProtKB/TrEMBL;Acc:Q7XA83]

Coordinates

chr4:+:6571894..6574586

Molecular Weight (calculated)

48720.2 Da

IEP (calculated)

10.768

GRAVY (calculated)

-0.808

Length

423 amino acids

Sequence
(BLAST)

001: MAKKNGTSWF TAVKKILWSP SKDSDKKTHH HKETDIKRKE KKGWIFRKTK LETTNSVLQH TVRTVEAEEK EKPPVIVSSV EEGVTEIVKL TATPGFIRRH
101: WAAIIIQTAF RGYLSRRALR ALKGIVKLQA LVRGNNVRNQ AKLTLRCIKA LVRVQDQVLN HHQQQRSRVL LSPPSRNYNI EARRNSMFAE SNGFWDTKTY
201: LQDIRSRRSL SRDMNRCNNE FYSEETELIL QKKLEIAIKR EKAQALALSN QIRSRSSRNQ SAGDDRELLE RTQWLDRWMA TKQWDDTITN STNVRDPIKT
301: LEAVTTHHHQ RSYPATPPSC RASRSVMVRS ASPRIPCSPS SMQPNYMSAT ESAKAKARTQ STPRRRPMTA KKRLCYAEEE SLRSPSFKSC LWGDHESDYS
401: CCYGDGFAGK ISPCSTTELR WLK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.