Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08131 | Canola | nucleus | 74.15 | 75.87 |
| Bra017988.1-P | Field mustard | nucleus | 75.0 | 75.43 |
| CDY05931 | Canola | nucleus | 73.3 | 73.3 |
| GSMUA_Achr6P02050_001 | Banana | cytosol | 13.35 | 30.32 |
| VIT_16s0098g01070.t01 | Wine grape | mitochondrion, nucleus | 35.51 | 27.06 |
| GSMUA_Achr1P18950_001 | Banana | nucleus | 31.82 | 24.45 |
| GSMUA_Achr1P16160_001 | Banana | nucleus | 30.97 | 24.33 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 31.53 | 24.08 |
| TraesCS7A01G317400.2 | Wheat | nucleus | 34.66 | 22.43 |
| TraesCS7B01G218800.3 | Wheat | nucleus | 34.66 | 22.39 |
| HORVU7Hr1G075720.1 | Barley | plasma membrane | 34.66 | 22.34 |
| Os08t0115200-01 | Rice | cytosol | 34.38 | 22.28 |
| AT4G10640.1 | Thale cress | nucleus | 26.7 | 22.22 |
| TraesCSU01G104800.3 | Wheat | nucleus | 34.38 | 22.2 |
| AT4G00820.1 | Thale cress | mitochondrion, nucleus | 33.24 | 21.91 |
| AT1G01110.2 | Thale cress | nucleus | 32.67 | 21.82 |
| Solyc01g009340.2.1 | Tomato | nucleus | 24.72 | 21.59 |
| AT3G52290.1 | Thale cress | cytosol | 26.14 | 21.4 |
| Zm00001d049684_P002 | Maize | cytosol, mitochondrion | 32.39 | 20.96 |
| EES14418 | Sorghum | cytosol | 33.81 | 20.73 |
| PGSC0003DMT400038175 | Potato | cytosol | 30.4 | 20.7 |
| AT2G26180.1 | Thale cress | cytosol | 22.44 | 18.99 |
| AT3G49260.3 | Thale cress | nucleus | 24.43 | 18.22 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 23.58 | 18.0 |
| AT3G22190.2 | Thale cress | cytosol | 21.31 | 17.77 |
| AT2G33990.1 | Thale cress | cytosol | 12.5 | 16.73 |
| AT3G15050.1 | Thale cress | plastid | 12.22 | 16.6 |
| AT1G72670.1 | Thale cress | cytosol | 19.32 | 16.43 |
| AT1G17480.1 | Thale cress | cytosol | 16.48 | 15.63 |
| AT3G59690.2 | Thale cress | nucleus | 22.73 | 15.47 |
| AT3G09710.2 | Thale cress | nucleus | 19.03 | 14.32 |
| AT2G26410.2 | Thale cress | cytosol | 17.9 | 11.95 |
| AT2G43680.1 | Thale cress | nucleus | 22.16 | 11.66 |
Protein Annotations
| MapMan:35.2 | EntrezGene:824100 | ProteinID:AAG52179.1 | ProteinID:AEE78534.1 | ArrayExpress:AT3G49380 | EnsemblPlantsGene:AT3G49380 |
| RefSeq:AT3G49380 | TAIR:AT3G49380 | RefSeq:AT3G49380-TAIR-G | EnsemblPlants:AT3G49380.1 | TAIR:AT3G49380.1 | ProteinID:CAB66417.1 |
| InterPro:DUF4005 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | RefSeq:NP_190507.1 | InterPro:P-loop_NTPase | PFAM:PF00612 | PFAM:PF13178 | PO:PO:0009005 |
| PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF92 | UniProt:Q9SG11 | SUPFAM:SSF52540 | UniParc:UPI00000A3E07 |
| Symbol:iqd15 | SEG:seg | : | : | : | : |
Description
iqd15IQ-domain 15 [Source:UniProtKB/TrEMBL;Acc:Q9SG11]
Coordinates
chr3:-:18311760..18313621
Molecular Weight (calculated)
40767.4 Da
IEP (calculated)
10.704
GRAVY (calculated)
-0.793
Length
352 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKTDGSSWF TAVKNVFRSP EKLIPRRINR RQDNDLVEEV EDELHQRPKR RKRRWLFKKV SSDPCAINVG INTTSTAINA IAAEETEKTV SPAAKETVFF
101: CRTSVYLKRH VAAILIQTAF RGCLARTAVR ALKGVVKLQA LVRGHNVRRR TSITLQRVQA LVRIQALALD HRKKLTTKLG DEISYSHAFS KQMWRTMERE
201: AHSESELEDK RPSRLNGYGY QETGRRMSTD QAIVEPVKIV EIDKYNNTYS HHQQLNDQTP RGNSFVTRQA HSIPNYMSTT ASTVARFRRP QSVPKQRSNR
301: TCLDNNEPRL RLVRKRLSFH NDNPQSYGYI AGDGYFWYDI DKRTNAHEDF QY
101: CRTSVYLKRH VAAILIQTAF RGCLARTAVR ALKGVVKLQA LVRGHNVRRR TSITLQRVQA LVRIQALALD HRKKLTTKLG DEISYSHAFS KQMWRTMERE
201: AHSESELEDK RPSRLNGYGY QETGRRMSTD QAIVEPVKIV EIDKYNNTYS HHQQLNDQTP RGNSFVTRQA HSIPNYMSTT ASTVARFRRP QSVPKQRSNR
301: TCLDNNEPRL RLVRKRLSFH NDNPQSYGYI AGDGYFWYDI DKRTNAHEDF QY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.