Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77034 | Canola | cytosol | 82.45 | 86.62 |
| CDY35313 | Canola | nucleus | 81.73 | 85.64 |
| Bra034294.1-P | Field mustard | nucleus | 81.49 | 85.39 |
| VIT_04s0008g01080.t01 | Wine grape | nucleus | 69.23 | 64.14 |
| Solyc08g062940.2.1 | Tomato | cytosol | 46.88 | 63.11 |
| PGSC0003DMT400021183 | Potato | cytosol | 61.54 | 58.99 |
| KRH15576 | Soybean | cytosol | 58.89 | 58.75 |
| KRH05433 | Soybean | cytosol | 57.69 | 58.11 |
| KRH61522 | Soybean | cytosol | 62.74 | 58.0 |
| KRH52206 | Soybean | cytosol | 61.3 | 56.67 |
| GSMUA_Achr6P04930_001 | Banana | cytosol | 49.76 | 50.99 |
| TraesCS3B01G124000.1 | Wheat | cytosol | 52.16 | 50.0 |
| TraesCS3D01G107700.1 | Wheat | cytosol | 52.16 | 49.89 |
| Os01t0194200-01 | Rice | cytosol | 52.88 | 49.77 |
| OQU86150 | Sorghum | cytosol | 52.88 | 49.55 |
| TraesCS3A01G105600.1 | Wheat | cytosol, nucleus, peroxisome | 51.44 | 48.86 |
| Zm00001d039471_P001 | Maize | cytosol | 52.16 | 48.22 |
| GSMUA_Achr2P16650_001 | Banana | nucleus | 49.04 | 48.11 |
| GSMUA_Achr7P09640_001 | Banana | endoplasmic reticulum | 47.12 | 47.57 |
| GSMUA_Achr10P... | Banana | cytosol | 47.12 | 46.34 |
| AT1G72670.1 | Thale cress | cytosol | 44.47 | 44.69 |
| HORVU3Hr1G019240.2 | Barley | mitochondrion, peroxisome | 51.44 | 43.23 |
| GSMUA_Achr2P15730_001 | Banana | cytosol | 43.75 | 41.27 |
| AT1G17480.1 | Thale cress | cytosol | 35.58 | 39.89 |
| AT2G33990.1 | Thale cress | cytosol | 21.63 | 34.22 |
| AT3G22190.2 | Thale cress | cytosol | 34.13 | 33.65 |
| AT3G15050.1 | Thale cress | plastid | 19.95 | 32.05 |
| AT3G52290.1 | Thale cress | cytosol | 28.37 | 27.44 |
| AT5G03040.1 | Thale cress | cytosol, plastid | 28.12 | 25.38 |
| AT4G10640.1 | Thale cress | nucleus | 25.0 | 24.59 |
| AT3G49260.3 | Thale cress | nucleus | 26.2 | 23.09 |
| AT3G49380.1 | Thale cress | nucleus | 18.99 | 22.44 |
| AT4G00820.1 | Thale cress | mitochondrion, nucleus | 28.37 | 22.1 |
| AT3G09710.2 | Thale cress | nucleus | 24.28 | 21.58 |
| AT1G01110.2 | Thale cress | nucleus | 27.16 | 21.44 |
| AT3G59690.2 | Thale cress | nucleus | 22.36 | 17.99 |
| AT2G26410.2 | Thale cress | cytosol | 22.6 | 17.84 |
| AT2G43680.1 | Thale cress | nucleus | 22.84 | 14.2 |
Protein Annotations
| Gene3D:1.20.5.190 | MapMan:35.1 | EntrezGene:817158 | UniProt:A0A178VX58 | ProteinID:AAC14531.1 | ProteinID:AEC07805.1 |
| ArrayExpress:AT2G26180 | EnsemblPlantsGene:AT2G26180 | RefSeq:AT2G26180 | TAIR:AT2G26180 | RefSeq:AT2G26180-TAIR-G | EnsemblPlants:AT2G26180.1 |
| TAIR:AT2G26180.1 | Unigene:At.48520 | EMBL:BT029734 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | InterPro:IPR000048 | Symbol:IQD6 |
| InterPro:IQ_motif_EF-hand-BS | RefSeq:NP_180187.1 | UniProt:O64852 | ProteinID:OAP09412.1 | PFAM:PF00612 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF86 | SMART:SM00015 |
| UniParc:UPI000009DB55 | SEG:seg | : | : | : | : |
Description
IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
Coordinates
chr2:-:11143290..11145103
Molecular Weight (calculated)
46892.1 Da
IEP (calculated)
11.196
GRAVY (calculated)
-0.746
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.