Factsheet for HORVU3Hr1G019240.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome

Predictor Summary:

mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G107700.1	Wheat	cytosol	83.43	94.94
TraesCS3A01G105600.1	Wheat	cytosol, nucleus, peroxisome	83.64	94.52
TraesCS3B01G124000.1	Wheat	cytosol	82.63	94.24
Os01t0194200-01	Rice	cytosol	72.73	81.45
OQU86150	Sorghum	cytosol	72.12	80.41
Zm00001d039471_P001	Maize	cytosol	71.11	78.22
Solyc08g062940.2.1	Tomato	cytosol	38.18	61.16
GSMUA_Achr6P04930_001	Banana	cytosol	49.49	60.34
GSMUA_Achr2P16650_001	Banana	nucleus	50.51	58.96
GSMUA_Achr7P09640_001	Banana	endoplasmic reticulum	47.68	57.28
VIT_04s0008g01080.t01	Wine grape	nucleus	49.9	55.01
GSMUA_Achr10P...	Banana	cytosol	46.06	53.9
PGSC0003DMT400021183	Potato	cytosol	46.46	53.0
KRH61522	Soybean	cytosol	48.08	52.89
Bra034294.1-P	Field mustard	nucleus	41.41	51.64
CDY35313	Canola	nucleus	41.41	51.64
KRH15576	Soybean	cytosol	43.43	51.56
AT2G26180.1	Thale cress	cytosol	43.23	51.44
CDX77034	Canola	cytosol	41.01	51.26
KRH52206	Soybean	cytosol	46.46	51.11
KRH05433	Soybean	cytosol	42.02	50.36
GSMUA_Achr2P15730_001	Banana	cytosol	41.62	46.71
HORVU3Hr1G066840.2	Barley	cytosol	33.74	39.2
HORVU1Hr1G079590.12	Barley	cytosol	31.72	33.55
HORVU7Hr1G024060.1	Barley	plastid	10.71	30.11
HORVU5Hr1G007780.1	Barley	cytosol	25.25	29.14
HORVU5Hr1G092660.2	Barley	nucleus	23.64	26.71
HORVU7Hr1G023980.1	Barley	nucleus	16.97	25.69
HORVU1Hr1G013210.1	Barley	cytosol	24.04	24.59
HORVU3Hr1G087500.2	Barley	cytosol	23.03	22.85
HORVU7Hr1G075720.1	Barley	plasma membrane	23.84	21.61
HORVU3Hr1G117830.2	Barley	endoplasmic reticulum, extracellular	21.62	18.32
HORVU1Hr1G071700.1	Barley	nucleus	18.99	18.29
HORVU3Hr1G089690.1	Barley	cytosol	18.18	14.33

Protein Annotations

EnsemblPlants:HORVU3Hr1G019240.2	EnsemblPlantsGene:HORVU3Hr1G019240	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295
PANTHER:PTHR32295:SF88	PFAM:PF00612	PFscan:PS50096	SEG:seg	UniParc:UPI000B47081C	UniProt:A0A287KBL5
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:52590760..52593281

Molecular Weight (calculated)

53922.5 Da

IEP (calculated)

11.091

GRAVY (calculated)

-0.482

Length

495 amino acids

Sequence
(BLAST)

001: SPPHRALSEA HAHAVAHTCL LRPASFALLL LLAVSFLETL SFLLSGGRRS GAVLGVEERE MGGSGKWVKS LIGLKKPDRE DCIKSKLLVP SVLGVGGKGR
101: KWRLWRTSSG DHGSLWRGSR GGSQRSAASE ASDDASSLAA AAADMFTAAL ATVARAPAKD FMAVRQEWAA IRIQTAFRGF LARRALXKGL VRLQAIVRGR
201: QVRKQAAVTL RCMQALVRVQ ARIRARRVRM STEGQAVQKL IQARRTKLDI LREAEEGWCD SQGTLEEVRV KLQKRQEGAI KRERAIAYVY QGVAKCNQPK
301: GSNGRSNQSG LLLKHQHCDK NNGSWSWLER WMAARPWENR LMEEHNQTTT SSPDLVPSSK DCEDAFGVLA DFSEPNSVKV RKNNVSKRIS AKPPGATHPH
401: RFKAQSISSL STDLHNDESS ASSSSCFAST PLSFSTLLTP EKTDGSGGVR SRPNYMSLTE SIKAKRKPCG AQRTGASKQL DDRKAPGADL KAAKA

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.