Factsheet for HORVU3Hr1G066840.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G280900.1	Wheat	cytosol	88.97	88.14
TraesCS3A01G251400.1	Wheat	cytosol	88.97	87.94
TraesCS3D01G251800.2	Wheat	cytosol	89.67	86.23
EES03502	Sorghum	mitochondrion	72.54	70.71
Os01t0708700-01	Rice	cytosol	70.42	68.03
Zm00001d043691_P001	Maize	mitochondrion	69.01	66.97
HORVU1Hr1G079590.12	Barley	cytosol	50.47	45.94
CDX72935	Canola	cytosol	22.77	36.88
Solyc03g121760.2.1	Tomato	cytosol	37.09	36.83
PGSC0003DMT400006376	Potato	cytosol	36.62	36.53
AT1G72670.1	Thale cress	cytosol	34.98	35.99
Bra016042.1-P	Field mustard	cytosol	33.57	34.71
Bra025971.1-P	Field mustard	nucleus	30.52	34.67
CDY26241	Canola	nucleus	30.52	34.67
AT1G17480.1	Thale cress	cytosol	30.05	34.5
CDY48305	Canola	nucleus	30.05	34.13
HORVU3Hr1G019240.2	Barley	mitochondrion, peroxisome	39.2	33.74
KRH10035	Soybean	cytosol	32.86	33.65
KRH23285	Soybean	nucleus	32.16	33.25
KRH44124	Soybean	mitochondrion	31.69	32.07
KRH47099	Soybean	cytosol	32.86	30.37
HORVU7Hr1G024060.1	Barley	plastid	11.27	27.27
HORVU5Hr1G007780.1	Barley	cytosol	27.0	26.81
HORVU5Hr1G092660.2	Barley	nucleus	24.65	23.97
HORVU7Hr1G023980.1	Barley	nucleus	18.31	23.85
HORVU1Hr1G013210.1	Barley	cytosol	25.82	22.73
HORVU3Hr1G087500.2	Barley	cytosol	25.82	22.04
HORVU7Hr1G075720.1	Barley	plasma membrane	25.59	19.96
HORVU1Hr1G071700.1	Barley	nucleus	21.13	17.51
HORVU3Hr1G117830.2	Barley	endoplasmic reticulum, extracellular	23.0	16.78
HORVU3Hr1G089690.1	Barley	cytosol	21.13	14.33

Protein Annotations

EnsemblPlants:HORVU3Hr1G066840.2	EnsemblPlantsGene:HORVU3Hr1G066840	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF34	PFAM:PF00612	PFscan:PS50096	SEG:seg
SMART:SM00015	UniParc:UPI000B47272F	UniProt:A0A287LFR7	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr3H:+:507758298..507760982

Molecular Weight (calculated)

46589.7 Da

IEP (calculated)

11.728

GRAVY (calculated)

-0.886

Length

426 amino acids

Sequence
(BLAST)

001: MGASGKWIKT LVGLKPAAAA EKERQHAGGK GRKWSRLWRS SSGGQRAAAX RPPPPPPTRS APSSQPWCAR RPRTSASSGR SRGAVRIQTA FRGFLARRAL
101: RALRGIVRLQ ALVRGRRVRK QLAVTVKCMQ ALVRVQARAR DRRTRLSADG RDSQDTLDDH SSHADPVKEA ETGWCDSQGT VDDVRSKIHM RREGAIKRER
201: AIAYALSHQR SSNHSGRPSS PAVSLKNHGT NRNNQWSYLD GWMATKPWES RLMEQSHSEQ TNSRCSESMD EMNEVSSKLS EASSVKVRKN NVTTRVSAKP
301: PSVIAVCEES APSTSSVTPM TGNHFGTSER RSDCGQGGAP SYMGLTKSAK ARLSGSSSTH KPPLQRQGSA ETHNYSRGAF SSIDVQSTAG SEVSVTSKRL
401: NRLTLKGRGT RRSMDKENDD QSNSFF

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.