Factsheet for TraesCS3B01G280900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G251400.1	Wheat	cytosol	98.37	98.14
TraesCS3D01G251800.2	Wheat	cytosol	98.84	95.94
HORVU3Hr1G066840.2	Barley	cytosol	88.14	88.97
EES03502	Sorghum	mitochondrion	77.67	76.43
Os01t0708700-01	Rice	cytosol	76.28	74.38
Zm00001d043691_P001	Maize	mitochondrion	73.95	72.44
TraesCS1B01G379600.1	Wheat	mitochondrion	55.12	56.97
CDX72935	Canola	cytosol	26.05	42.59
TraesCS3B01G124000.1	Wheat	cytosol	42.79	42.4
Solyc03g121760.2.1	Tomato	cytosol	40.7	40.79
PGSC0003DMT400006376	Potato	cytosol	40.23	40.52
Bra025971.1-P	Field mustard	nucleus	33.72	38.67
CDY26241	Canola	nucleus	33.72	38.67
AT1G72670.1	Thale cress	cytosol	36.98	38.41
CDY48305	Canola	nucleus	33.26	38.13
Bra016042.1-P	Field mustard	cytosol	36.28	37.86
KRH10035	Soybean	cytosol	36.28	37.5
AT1G17480.1	Thale cress	cytosol	32.33	37.47
KRH23285	Soybean	nucleus	35.58	37.14
KRH44124	Soybean	mitochondrion	35.35	36.1
KRH47099	Soybean	cytosol	36.74	34.27
TraesCS5B01G427800.1	Wheat	cytosol, mitochondrion	25.58	25.58
TraesCS7B01G010100.1	Wheat	nucleus	18.6	24.46
TraesCS5B01G028200.1	Wheat	nucleus	24.88	24.15
TraesCS5B01G375000.1	Wheat	nucleus	24.42	24.08
TraesCS1B01G082100.1	Wheat	cytosol	26.05	23.33
TraesCS3B01G385100.1	Wheat	cytosol	26.28	22.65
TraesCS7B01G218800.3	Wheat	nucleus	26.98	21.28
TraesCS3B01G603500.1	Wheat	cytosol, mitochondrion	24.19	19.77
TraesCS1B01G297500.1	Wheat	cytosol	22.79	18.56
TraesCS3B01G431200.1	Wheat	cytosol	21.16	14.54

Protein Annotations

EnsemblPlants:TraesCS3B01G280900.1	EnsemblPlantsGene:TraesCS3B01G280900	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF34	PFAM:PF00612	PFscan:PS50096
SEG:seg	SMART:SM00015	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3B:+:451530253..451532359

Molecular Weight (calculated)

46919.0 Da

IEP (calculated)

11.295

GRAVY (calculated)

-0.718

Length

430 amino acids

Sequence
(BLAST)

001: MGASGKWIKT LVGLKPAADK ERHAGGKGRK WSRLWRSSSG GQRAAASAAA SEVSETSSAA ADALSSVVAA VVRAPPKDFR VIRQEWAAVR IQTAFRGFLA
101: RRALRALRGI VRLQALVRGR RVRKQLAVTV KCMQALVRVL ARARDRRTRL SADGRDSQDT LDDHSSHADP VKEAETGWCD SQGTVDDVRS KIHMRREGAI
201: KRERAIAYAL SHQRNSNHNG RPSSPAVSLK NHGTNRSNQW SYLDGWMATK PWESRLMEQS HSEQTNSRCS ESIDEMNEVS SKLSEASSVK IRRNNVTTRV
301: SAKPPSVIAV CDESAPSTSS VTQMTGNHFA TSERRSDCGQ GGAPSYMGLT KSAKARLSGS SSTHKPPLQR QGSADTHNYS RGAFSSIDVQ STAGSEVSVT
401: SKRLNGLTLK GRGTRRSMDK ENDDQSNSFF

Best Arabidopsis Sequence Match ( AT1G17480.1 )
(BLAST)

001: MGGSGNWIRS LISNRKPVND QQEKLSDKSS KKKWKLWRIS SESLASSSFK SRGSYAASSL GSELPSFSAD EAFTTAMAAL IRAPPRDFLM VKREWASTRI
101: QAAFRAFLAR QAFRALKAVV RIQAIFRGRQ VRKQAAVTLR CMQALVRVQS RVRAHRRAPS DSLELKDPVK QTEKGWCGSP RSIKEVKTKL QMKQEGAIKR
201: ERAMVYALTH QSRTCPSPSG RAITHHGLRK SSPGWNWYDD VGTFSRKSSE SSVLSEYETV TVRKNNLSST RVLARPPLLL PPVSSGMSYD SLHDETSTSS
301: TSQSPVAFSS SVLDGGGYYR KPSYMSLTQS TQAKQRQSGL SCNGDARRSA GSDQCTDLYP PGNVWAKSQR S

Arabidopsis Description

IQD7At1g17480 [Source:UniProtKB/TrEMBL;Acc:Q2NND9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.