CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47099	Soybean	cytosol	91.69	83.73
KRH10035	Soybean	cytosol	60.33	61.06
KRH23285	Soybean	nucleus	59.14	60.44
CDX72935	Canola	cytosol	28.98	46.39
PGSC0003DMT400006376	Potato	cytosol	44.42	43.79
Solyc03g121760.2.1	Tomato	cytosol	44.42	43.59
Bra025971.1-P	Field mustard	nucleus	38.72	43.47
CDY26241	Canola	nucleus	38.72	43.47
KRH15576	Soybean	cytosol	42.99	43.41
AT1G17480.1	Thale cress	cytosol	38.24	43.4
CDY48305	Canola	nucleus	38.48	43.2
KRH05433	Soybean	cytosol	42.28	43.1
AT1G72670.1	Thale cress	cytosol	41.81	42.51
KRH61522	Soybean	cytosol	45.37	42.44
Bra016042.1-P	Field mustard	cytosol	41.33	42.23
KRH52206	Soybean	cytosol	44.89	42.0
TraesCS3B01G280900.1	Wheat	cytosol	36.1	35.35
TraesCS3A01G251400.1	Wheat	cytosol	35.87	35.03
TraesCS3D01G251800.2	Wheat	cytosol	36.82	34.99
Os01t0708700-01	Rice	cytosol	35.63	34.01
EES03502	Sorghum	mitochondrion	34.92	33.64
Zm00001d038861_P001	Maize	cytosol, plastid	34.2	33.57
Os05t0541100-01	Rice	plastid	32.07	33.09
Zm00001d043691_P001	Maize	mitochondrion	34.44	33.03
HORVU3Hr1G066840.2	Barley	cytosol	32.07	31.69
TraesCS1B01G379600.1	Wheat	mitochondrion	30.17	30.53
TraesCS1A01G362400.1	Wheat	mitochondrion	28.5	29.34
KRH22612	Soybean	cytosol	29.22	28.94
KRH26707	Soybean	cytosol	28.27	28.2
KRH39086	Soybean	cytosol	28.98	28.11
TraesCS1D01G367300.2	Wheat	mitochondrion, plastid	28.98	27.05
HORVU1Hr1G079590.12	Barley	cytosol	28.98	26.07
KXG22437	Sorghum	mitochondrion, plastid	33.49	25.82
KRH32840	Soybean	mitochondrion, nucleus	8.08	25.76
KRH50151	Soybean	cytosol	17.58	25.52
KRH21320	Soybean	cytosol	17.34	24.41
KRH20344	Soybean	cytosol	16.63	23.57
KRH10977	Soybean	cytosol	16.86	23.05
KRH53505	Soybean	cytosol	23.99	22.65
KRH64435	Soybean	nucleus	24.23	22.03
KRH55128	Soybean	mitochondrion, nucleus	14.96	21.28
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	23.04	21.18
KRG95941	Soybean	nucleus	23.75	20.96
KRH67648	Soybean	nucleus	23.52	20.75
KRH27315	Soybean	cytosol	14.49	20.75
KRH19825	Soybean	cytosol	22.33	20.0
KRH47821	Soybean	nucleus	25.65	19.78
KRH57858	Soybean	cytosol	21.14	19.6
KRH06386	Soybean	mitochondrion, nucleus	25.42	19.45
KRH32420	Soybean	cytosol	21.85	19.41
KRH04761	Soybean	cytosol	21.85	19.05
KRH37691	Soybean	mitochondrion	8.08	18.78
KRH34906	Soybean	cytosol	21.14	18.43
KRG91856	Soybean	cytosol	21.14	18.2
KRH22000	Soybean	plastid	14.49	17.78
KRH71267	Soybean	cytosol	18.53	14.58
KRH50198	Soybean	cytosol	18.29	14.45

Protein Annotations

EMBL:ACUP02004908	EnsemblPlants:KRH44124	EnsemblPlantsGene:GLYMA_08G191400	EntrezGene:100806397	Gene3D:1.20.5.190	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295
PANTHER:PTHR32295:SF86	PFAM:PF00612	PFscan:PS50096	ProteinID:KRH44124	ProteinID:KRH44124.1	SEG:seg
SMART:SM00015	SUPFAM:SSF52540	UniParc:UPI00023392C1	UniProt:I1KUS5	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr8:+:15384041..15386955

Molecular Weight (calculated)

46420.6 Da

IEP (calculated)

11.044

GRAVY (calculated)

-0.585

Length

421 amino acids

Sequence
(BLAST)

001: MGGSGRWLKS LISLRRPSPT DQEKGGGKSK RQWKLWKSTS EGFGIGSSMH KGQGGGGSFV VDGGAFAAAL AAVVRTPLKD FMVIKQEWAA IRIQAVFRGF
101: LARRALRALK AVVRLQAIFR GWQVRKQAAV TLRCMQALVR VQARVKARNV GNSQEGKYAR CNEADPVKQA EQGWCDIPRT AEEAKLQMRQ EGAIKRDRTK
201: AYSQSKKKLT ASPNSRASKS VIPLKNRKLD RKSSGWNMLD RWMAAKPWES RSMVEMYLDS PVMTPVTSKS DHLVLPFNSN QQIGTVKARR NGVTTRISTK
301: SLTTSQSTPS SSAISSECMY DDSPMSTSCT SGSPARPSNN NVTVEPTEET NACKPSYMNL TASTKAKLKP CRCFSQNSKT IFMDDCVSLS GVTRSSSGSY
401: PSANTWKNLY ATPLRTSYQR Q

Best Arabidopsis Sequence Match ( AT1G72670.1 )
(BLAST)

001: MGGSGNWIKS LITNKKNITD DQEKNIKKKW KLWRTSSEGL ISSSKGFKSR GGSYGTPSLG SDPPSFSADD SFTAAVAAVI RAPPKDFFLV KREWAATRIQ
101: AAFRAFLARQ ALRALKAVVR IQAIFRGRQV RKQADVTLRC MQALVRVQAR VRAHCNRGPS DGQELEKPSD QQKDDPAKQA EKGWCDSPGS INEVRTKLQM
201: RQEGAIKRER AMVYALTHQP RTCPSPAKAS KQGSVKKNNG SCKSSPGWNW LDRWVADRPW EGRLMEGPTN SSENARKSES SVSEHDTVQV RKNNLTTRVL
301: ARPPPMSSSA TSSESSSTSQ SPVPFSGSFL EEGGYYRKPS YMSLTQSIKA KQRRSGSSSS CSKTPFEKKQ SMSYNGDVNV RRSAGSDPLN NQWTDLYPPA
401: QVTGRHMWAK SQRG

Arabidopsis Description

iqd8At1g72670 [Source:UniProtKB/TrEMBL;Acc:Q9CAI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.