Factsheet for Os05t0541100-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0708700-01	Rice	cytosol	67.65	62.59
TraesCS1B01G379600.1	Wheat	mitochondrion	63.48	62.26
Zm00001d038861_P001	Maize	cytosol, plastid	65.44	62.24
TraesCS1A01G362400.1	Wheat	mitochondrion	61.76	61.61
TraesCS1D01G367300.2	Wheat	mitochondrion, plastid	62.99	56.98
HORVU1Hr1G079590.12	Barley	cytosol	62.01	54.06
KXG22437	Sorghum	mitochondrion, plastid	70.34	52.56
CDX72935	Canola	cytosol	27.45	42.59
Os01t0194200-01	Rice	cytosol	41.42	38.24
Solyc03g121760.2.1	Tomato	cytosol	39.46	37.53
PGSC0003DMT400006376	Potato	cytosol	39.22	37.47
Bra016042.1-P	Field mustard	cytosol	37.5	37.14
AT1G72670.1	Thale cress	cytosol	37.25	36.72
AT1G17480.1	Thale cress	cytosol	33.09	36.39
Bra025971.1-P	Field mustard	nucleus	33.33	36.27
CDY26241	Canola	nucleus	33.33	36.27
CDY48305	Canola	nucleus	32.6	35.47
KRH10035	Soybean	cytosol	35.54	34.86
KRH23285	Soybean	nucleus	33.82	33.5
KRH44124	Soybean	mitochondrion	33.09	32.07
KRH47099	Soybean	cytosol	34.31	30.37
Os12t0619000-01	Rice	cytosol	29.66	27.38
Os03t0648300-01	Rice	cytosol	27.21	25.23
Os03t0787200-01	Rice	cytosol	25.98	25.12
Os05t0123200-01	Rice	plasma membrane	26.72	23.0
Os01t0833800-01	Rice	plasma membrane	27.21	22.2
Os06t0155300-01	Rice	plasma membrane	18.14	20.96
Os08t0115200-01	Rice	cytosol	26.47	19.89
Os05t0463300-00	Rice	plasma membrane	23.28	18.92
Os01t0896200-01	Rice	mitochondrion	15.44	18.69

Protein Annotations

EnsemblPlants:Os05t0541100-01	EnsemblPlantsGene:Os05g0541100	EntrezGene:4339471	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF34	PFAM:PF00612	PFscan:PS50096
ProteinID:BAF18100.1	ProteinID:BAS95121.1	ProteinID:EEE64538.1	RefSeq:XP_015640404.1	SEG:seg	UniParc:UPI0000351D94
UniProt:Q0DGC3	MapMan:35.2	:	:	:	:

Description

IQ calmodulin-binding region domain containing protein. (Os05t0541100-01)

Coordinates

chr5:+:26863363..26866131

Molecular Weight (calculated)

44571.5 Da

IEP (calculated)

11.268

GRAVY (calculated)

-0.631

Length

408 amino acids

Sequence
(BLAST)

001: MGASGKWIKS LVSLKAAPEG TTKGRRWTRL WRSSSSASAS ASTAGDASES ASSEADAFSS VVAAVVRAPP RDFRVIRQEW AAVRVQAAFR AFLARRALKA
101: LRGIVRLQAL VRGRLVRRQL AVTLKCMNAL LRVQERARER RARCSADGRD SQDAVGERDG RADPIKQAEE QWCDSQGSVS EVRSKIHMRH DAVAKRERAI
201: AYALSHQPRS SKQSARPSSP ARSLRNHESN RCNHDWSYIE GWMATKPWES RLMEQSHAEL KCSKNSGELN LAGAQLSNAS SVKMRGNRVA AKPPSVLSAS
301: SSDFPCDVSS ASTSSATPAR SDGGHGEGPS YMSLTKSAKA RQSCNSPFQI QRQRSGGMSS YKRVALSPLD VQSNACSEFS VTSRKLNSLS LKGRSMTRSL
401: DKENDNLF

Best Arabidopsis Sequence Match ( AT1G72670.1 )
(BLAST)

001: MGGSGNWIKS LITNKKNITD DQEKNIKKKW KLWRTSSEGL ISSSKGFKSR GGSYGTPSLG SDPPSFSADD SFTAAVAAVI RAPPKDFFLV KREWAATRIQ
101: AAFRAFLARQ ALRALKAVVR IQAIFRGRQV RKQADVTLRC MQALVRVQAR VRAHCNRGPS DGQELEKPSD QQKDDPAKQA EKGWCDSPGS INEVRTKLQM
201: RQEGAIKRER AMVYALTHQP RTCPSPAKAS KQGSVKKNNG SCKSSPGWNW LDRWVADRPW EGRLMEGPTN SSENARKSES SVSEHDTVQV RKNNLTTRVL
301: ARPPPMSSSA TSSESSSTSQ SPVPFSGSFL EEGGYYRKPS YMSLTQSIKA KQRRSGSSSS CSKTPFEKKQ SMSYNGDVNV RRSAGSDPLN NQWTDLYPPA
401: QVTGRHMWAK SQRG

Arabidopsis Description

iqd8At1g72670 [Source:UniProtKB/TrEMBL;Acc:Q9CAI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.