Factsheet for Os01t0833800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0708400-01
Os11t0171500-01
Os12t0169800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03040.1	Os02t0708400-01	AT3G27960.1	21798944
AT5G03040.1	Os11t0171500-01	AT4G09570.1	19130088
AT5G03040.1	Os12t0169800-00	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G087500.2	Barley	cytosol	83.0	83.17
TraesCS3D01G346500.1	Wheat	cytosol	82.8	82.97
TraesCS3B01G385100.1	Wheat	cytosol	82.8	82.97
TraesCS3A01G352500.1	Wheat	cytosol	82.8	82.97
KXG33651	Sorghum	cytosol	82.0	82.33
Zm00001d042973_P007	Maize	cytosol	81.4	80.28
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	50.2	54.68
GSMUA_Achr7P22680_001	Banana	cytosol	50.4	54.19
PGSC0003DMT400004433	Potato	cytosol	49.4	51.46
Solyc10g084280.1.1	Tomato	nucleus	48.4	50.63
VIT_08s0040g02360.t01	Wine grape	nucleus	48.4	50.52
Solyc09g007410.2.1	Tomato	cytosol	48.6	50.31
GSMUA_Achr10P...	Banana	cytosol	42.2	50.0
PGSC0003DMT400027139	Potato	cytosol	48.0	49.9
Os05t0123200-01	Rice	plasma membrane	46.6	49.16
PGSC0003DMT400045333	Potato	cytosol	45.6	48.41
KRG95941	Soybean	nucleus	45.8	48.01
KRH67648	Soybean	nucleus	45.8	48.01
Solyc10g086060.1.1	Tomato	cytosol	45.0	47.77
CDY11238	Canola	cytosol, plastid	38.6	46.73
KRH32420	Soybean	cytosol	44.2	46.62
GSMUA_Achr11P...	Banana	mitochondrion	42.4	45.89
KRH19825	Soybean	cytosol	42.8	45.53
CDX80849	Canola	cytosol, plastid	37.8	44.37
CDY10410	Canola	cytosol, plastid	37.6	42.34
AT5G03040.1	Thale cress	cytosol, plastid	38.8	42.08
CDY04876	Canola	nucleus, plastid	37.0	41.57
CDY55696	Canola	nucleus, plastid	36.0	41.19
Bra028854.1-P	Field mustard	nucleus, plastid	36.6	41.12
Bra009554.1-P	Field mustard	cytosol	36.6	38.85
CDX70333	Canola	cytosol	37.2	38.75
Os05t0463300-00	Rice	plasma membrane	37.2	37.05
AT3G09710.2	Thale cress	nucleus	34.2	36.54
Bra034081.1-P	Field mustard	nucleus	30.0	33.78
Bra001299.1-P	Field mustard	nucleus	28.4	30.02
CDX73992	Canola	nucleus	28.0	29.35
CDY07937	Canola	nucleus	28.0	29.29
CDY22198	Canola	cytosol	31.4	28.09
CDY41307	Canola	cytosol	30.4	27.79
Os01t0194200-01	Rice	cytosol	24.2	27.38
Os08t0115200-01	Rice	cytosol	29.6	27.26
Os05t0541100-01	Rice	plastid	22.2	27.21
Os01t0896200-01	Rice	mitochondrion	18.0	26.71
Os01t0708700-01	Rice	cytosol	23.4	26.53
Os12t0619000-01	Rice	cytosol	22.8	25.79
Os03t0787200-01	Rice	cytosol	21.4	25.36
Os06t0155300-01	Rice	plasma membrane	17.2	24.36
Os03t0648300-01	Rice	cytosol	19.4	22.05

Protein Annotations

MapMan:35.1	EntrezGene:4327410	EMBL:AK072219	ProteinID:BAD73780.1	ProteinID:BAF06630.1	ProteinID:BAS75080.1
ProteinID:BAS75081.1	ncoils:Coil	ProteinID:EEE55631.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	EnsemblPlantsGene:Os01g0833800	EnsemblPlants:Os01t0833800-01	PFAM:PF00612	PFscan:PS50096
PANTHER:PTHR32295	PANTHER:PTHR32295:SF28	UniProt:Q5QLD5	SMART:SM00015	UniParc:UPI000048E074	RefSeq:XP_015621415.1
RefSeq:XP_015621416.1	RefSeq:XP_015621417.1	RefSeq:XP_015621418.1	SEG:seg	:	:

Description

IQ calmodulin-binding region domain containing protein. (Os01t0833800-01);Similar to cDNA clone:J013168C19, full insert sequence. (Os01t0833800-02)

Coordinates

chr1:-:35709694..35713436

Molecular Weight (calculated)

56093.3 Da

IEP (calculated)

10.893

GRAVY (calculated)

-0.902

Length

500 amino acids

Sequence
(BLAST)

001: MGKKGNWFSA VKKVFSSSDP DGREAKIEKA DKSRSRRKWP FGKSKKSDPW TSTVAVPTST APPPQPPPPP PTHPIQPQPE EIKDVKAVET DSEQNKHAYS
101: VALASAVAAE AAAVAAQAAA EVVRLTTATT AVPKSPVSSK DELAAIKIQT AFRGYLARRA LRALRGLVRL KSLVDGNAVK RQTAHTLHCT QTMTRVQTQI
201: YSRRVKMEEE KQALQRQLQL KHQRELEKMK IDEDWDHSHQ SKEQVETSLM MKQEAALRRE RALAYAFSHQ WKNSGRTITP TFTDQGNPNW GWSWMERWMT
301: SRPWESRVIS DKDPKDHYST KNPSTSASRT YVPRAISIQR PATPNKSSRP PSRQSPSTPP SRVPSVTGKI RPASPRDSWL YKEDDLRSIT SIRSERPRRQ
401: STGGASVRDD ASLTSTPALP SYMQSTESAR AKSRYRSLLT DRFEVPERVP LVHSSIKKRL SFPVADKPNG EHADKLMERG RRHSDPPKVD PASLKDVPVS

Best Arabidopsis Sequence Match ( AT5G03040.2 )
(BLAST)

001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S

Arabidopsis Description

iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.