Factsheet for Os05t0463300-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0708400-01
Os11t0171500-01
Os12t0169800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03040.1	Os02t0708400-01	AT3G27960.1	21798944
AT5G03040.1	Os11t0171500-01	AT4G09570.1	19130088
AT5G03040.1	Os12t0169800-00	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G071700.1	Barley	nucleus	50.2	49.03
TraesCS1B01G297500.1	Wheat	cytosol	51.39	48.86
TraesCS1A01G288100.2	Wheat	nucleus	50.6	48.75
TraesCS1D01G287100.2	Wheat	cytosol	51.0	48.39
OQU78148	Sorghum	cytosol	46.41	41.61
Zm00001d038395_P005	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.41	37.38
Os01t0833800-01	Rice	plasma membrane	37.05	37.2
CDY11238	Canola	cytosol, plastid	27.49	33.41
Os05t0123200-01	Rice	plasma membrane	31.47	33.33
KRG95941	Soybean	nucleus	31.67	33.33
GSMUA_Achr10P...	Banana	cytosol	27.89	33.18
GSMUA_Achr7P22680_001	Banana	cytosol	30.68	33.12
Solyc10g084280.1.1	Tomato	nucleus	31.47	33.05
KRH19825	Soybean	cytosol	30.88	32.98
Solyc09g007410.2.1	Tomato	cytosol	31.67	32.92
PGSC0003DMT400004433	Potato	cytosol	31.47	32.92
VIT_08s0040g02360.t01	Wine grape	nucleus	31.27	32.78
KRH67648	Soybean	nucleus	31.08	32.7
PGSC0003DMT400027139	Potato	cytosol	31.08	32.43
CDX80849	Canola	cytosol, plastid	27.49	32.39
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	29.28	32.03
KRH32420	Soybean	cytosol	29.88	31.65
CDY10410	Canola	cytosol, plastid	27.89	31.53
CDY04876	Canola	nucleus, plastid	27.89	31.46
CDY55696	Canola	nucleus, plastid	27.09	31.12
Bra028854.1-P	Field mustard	nucleus, plastid	27.49	31.01
PGSC0003DMT400045333	Potato	cytosol	29.08	31.0
AT5G03040.1	Thale cress	cytosol, plastid	28.29	30.8
Solyc10g086060.1.1	Tomato	cytosol	28.69	30.57
GSMUA_Achr11P...	Banana	mitochondrion	27.49	29.87
Bra009554.1-P	Field mustard	cytosol	27.09	28.87
CDX70333	Canola	cytosol	27.29	28.54
AT3G09710.2	Thale cress	nucleus	24.9	26.71
Bra034081.1-P	Field mustard	nucleus	22.51	25.45
Os05t0541100-01	Rice	plastid	18.92	23.28
Os01t0708700-01	Rice	cytosol	19.32	22.0
Bra001299.1-P	Field mustard	nucleus	20.32	21.56
CDX73992	Canola	nucleus	20.32	21.38
Os01t0896200-01	Rice	mitochondrion	14.34	21.36
CDY07937	Canola	nucleus	20.12	21.13
CDY22198	Canola	cytosol	23.31	20.93
Os12t0619000-01	Rice	cytosol	18.33	20.81
CDY41307	Canola	cytosol	22.51	20.66
Os08t0115200-01	Rice	cytosol	22.31	20.63
Os01t0194200-01	Rice	cytosol	17.93	20.36
Os06t0155300-01	Rice	plasma membrane	13.74	19.55
Os03t0787200-01	Rice	cytosol	16.33	19.43
Os03t0648300-01	Rice	cytosol	15.74	17.95

Protein Annotations

EnsemblPlants:Os05t0463300-00	EnsemblPlantsGene:Os05g0463300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF6	PFscan:PS50096	ProteinID:BAS94429.1	SEG:seg
UniParc:UPI00039389E0	UniProt:A0A0P0WNG8	MapMan:35.1	:	:	:

Description

OsSTA152Hypothetical conserved gene. (Os05t0463300-00)

Coordinates

chr5:-:22756240..22758478

Molecular Weight (calculated)

54445.6 Da

IEP (calculated)

11.962

GRAVY (calculated)

-0.771

Length

502 amino acids

Sequence
(BLAST)

001: SSADVFEREK GKRSTLKKIL QFSKSSASTS SPPVTSPSAR QQPHHHHPPP PQAAPPDRQR DDGIKEAKSS DAAAAAAQKT ATATAVTRPT TTAPRAPARS
101: AEELAAVKIQ KACRVYLGRR SQRARGLDRL MLLLEGLAVK RQTYEALYCM QTMTRVQTQI HSRRVKTEED KKALKSQVHV KQSLDRIKIG ESWDHGHQSK
201: EQIETVLTMK QEAALRRQRA LAYAFSHQWS NRKPSSARAS PPPMFMDTGN PNWGWSWAER WMAAARPWES QTTPANSGRA AAAVKGGGSG RRVPMSVQIP
301: TSTPALARFT RPPSCPSPST PTPRSPWRTS AVPPSSPGAS PFRRSATATT GLRRTTSLQP ERPRSCERRA AGSVSPVHGE KGGVVLLSLR RTTSLRSGEL
401: PRRLSLGGGG GGPARDDAAP LTPSYMQTTK SVKAKAARPA AIEVPVTAER TAPDHHQVTS PSVINRRLSL GSADRLSSVP SPSKAKAERS TPRRSRPPSP
501: RF

Best Arabidopsis Sequence Match ( AT3G09710.1 )
(BLAST)

001: MVKKAKWLKN VKKAFSPDSK KLKHESVECQ DSVISYPVLI ATSRSSSPQF EVRVDEVNYE QKKNLYPPSS DSVTATVAHV LVDSPPSSPE SVHQAIVVNR
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP

Arabidopsis Description

IQD1IQ-domain 1 [Source:UniProtKB/TrEMBL;Acc:F4J1A4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.