Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41307 | Canola | cytosol | 90.16 | 92.14 |
| AT3G09710.2 | Thale cress | nucleus | 57.96 | 69.23 |
| CDX73992 | Canola | nucleus | 56.89 | 66.67 |
| CDY07937 | Canola | nucleus | 56.89 | 66.53 |
| CDY11238 | Canola | cytosol, plastid | 41.32 | 55.93 |
| CDX80849 | Canola | cytosol, plastid | 42.4 | 55.63 |
| CDY04876 | Canola | nucleus, plastid | 43.47 | 54.61 |
| CDY10410 | Canola | cytosol, plastid | 42.93 | 54.05 |
| CDY55696 | Canola | nucleus, plastid | 42.04 | 53.78 |
| CDX70333 | Canola | cytosol | 42.22 | 49.17 |
| KRG95941 | Soybean | nucleus | 36.14 | 42.35 |
| KRH67648 | Soybean | nucleus | 35.6 | 41.72 |
| VIT_08s0040g02360.t01 | Wine grape | nucleus | 35.42 | 41.34 |
| KRH19825 | Soybean | cytosol | 33.63 | 40.0 |
| PGSC0003DMT400045333 | Potato | cytosol | 33.63 | 39.92 |
| Solyc10g086060.1.1 | Tomato | cytosol | 33.63 | 39.92 |
| Os05t0123200-01 | Rice | plasma membrane | 33.63 | 39.66 |
| KXG21175 | Sorghum | cytosol | 33.45 | 39.53 |
| KRH32420 | Soybean | cytosol | 33.45 | 39.45 |
| GSMUA_Achr10P... | Banana | nucleus | 31.31 | 38.89 |
| Zm00001d035492_P009 | Maize | cytosol | 33.09 | 38.87 |
| TraesCS1A01G064100.1 | Wheat | cytosol | 33.27 | 38.75 |
| TraesCS1D01G064700.1 | Wheat | cytosol | 33.09 | 38.7 |
| GSMUA_Achr3P17820_001 | Banana | cytosol | 33.09 | 38.7 |
| TraesCS1B01G082100.1 | Wheat | cytosol | 33.09 | 38.54 |
| HORVU1Hr1G013210.1 | Barley | cytosol | 33.27 | 38.43 |
| PGSC0003DMT400004433 | Potato | cytosol | 32.74 | 38.12 |
| Solyc10g084280.1.1 | Tomato | nucleus | 32.56 | 38.08 |
| PGSC0003DMT400027139 | Potato | cytosol | 32.74 | 38.05 |
| Zm00001d010975_P003 | Maize | cytosol | 32.38 | 37.87 |
| Solyc09g007410.2.1 | Tomato | cytosol | 32.2 | 37.27 |
| GSMUA_Achr7P18240_001 | Banana | cytosol | 30.95 | 36.65 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 29.87 | 36.38 |
| CDX95328 | Canola | cytosol | 28.09 | 35.28 |
| CDY23202 | Canola | cytosol | 28.09 | 35.28 |
| GSMUA_Achr10P... | Banana | cytosol | 25.58 | 33.89 |
| GSMUA_Achr7P22680_001 | Banana | cytosol | 28.09 | 33.76 |
| TraesCS3D01G543500.1 | Wheat | cytosol | 29.87 | 33.67 |
| TraesCS3B01G385100.1 | Wheat | cytosol | 28.62 | 32.06 |
| TraesCS3B01G603500.1 | Wheat | cytosol, mitochondrion | 30.05 | 31.94 |
| HORVU3Hr1G087500.2 | Barley | cytosol | 28.44 | 31.86 |
| TraesCS3D01G346500.1 | Wheat | cytosol | 28.44 | 31.86 |
| TraesCS3A01G352500.1 | Wheat | cytosol | 28.44 | 31.86 |
| KXG33651 | Sorghum | cytosol | 28.26 | 31.73 |
| Os01t0833800-01 | Rice | plasma membrane | 28.09 | 31.4 |
| TraesCS3A01G538100.1 | Wheat | cytosol, mitochondrion | 29.52 | 31.07 |
| Zm00001d042973_P007 | Maize | cytosol | 27.91 | 30.77 |
| CDY27925 | Canola | plastid | 14.31 | 30.19 |
| CDY17214 | Canola | cytosol, plastid | 14.31 | 30.19 |
| GSMUA_Achr11P... | Banana | mitochondrion | 24.87 | 30.09 |
| HORVU3Hr1G117830.2 | Barley | endoplasmic reticulum, extracellular | 29.7 | 28.42 |
| CDY32322 | Canola | cytosol, plastid | 13.06 | 28.19 |
| CDY38525 | Canola | cytosol | 20.75 | 28.09 |
| CDY20099 | Canola | cytosol | 12.34 | 26.14 |
| CDY62768 | Canola | cytosol | 12.88 | 25.99 |
| CDX83237 | Canola | cytosol | 21.82 | 24.06 |
| CDY37387 | Canola | cytosol | 16.46 | 23.96 |
| HORVU1Hr1G071700.1 | Barley | nucleus | 21.65 | 23.54 |
| CDY35313 | Canola | nucleus | 16.64 | 23.43 |
| Os05t0463300-00 | Rice | plasma membrane | 20.93 | 23.31 |
| CDY10618 | Canola | cytosol | 16.82 | 23.15 |
| TraesCS1A01G288100.2 | Wheat | nucleus | 21.47 | 23.03 |
| CDY24286 | Canola | cytosol | 16.64 | 23.02 |
| CDX77034 | Canola | cytosol | 16.28 | 22.98 |
| OQU78148 | Sorghum | cytosol | 22.72 | 22.68 |
| CDX96427 | Canola | cytosol | 9.84 | 22.63 |
| TraesCS1D01G287100.2 | Wheat | cytosol | 21.29 | 22.5 |
| CDX92933 | Canola | cytosol, plastid | 16.1 | 22.44 |
| CDX72935 | Canola | cytosol | 10.38 | 22.05 |
| TraesCS1B01G297500.1 | Wheat | cytosol | 20.39 | 21.59 |
| CDX92931 | Canola | mitochondrion, nucleus | 9.66 | 21.18 |
| CDY24282 | Canola | mitochondrion | 10.91 | 20.0 |
| CDY05984 | Canola | nucleus | 17.71 | 20.0 |
| CDX71881 | Canola | nucleus | 17.53 | 19.84 |
| CDY30433 | Canola | cytosol | 15.92 | 19.78 |
| CDY58749 | Canola | cytosol | 16.1 | 19.74 |
| CDX90766 | Canola | nucleus | 15.21 | 19.72 |
| CDY05111 | Canola | nucleus | 15.03 | 19.58 |
| CDX90011 | Canola | nucleus | 17.53 | 19.29 |
| CDY15200 | Canola | nucleus | 17.53 | 19.18 |
| CDY23391 | Canola | cytosol | 15.74 | 19.09 |
| CDY08131 | Canola | nucleus | 11.63 | 18.9 |
| CDX91859 | Canola | mitochondrion, nucleus | 17.71 | 18.68 |
| CDY69140 | Canola | mitochondrion, nucleus | 17.35 | 18.48 |
| CDY26241 | Canola | nucleus | 12.34 | 18.4 |
| CDY48305 | Canola | nucleus | 12.34 | 18.4 |
| CDY08120 | Canola | mitochondrion, nucleus | 15.56 | 18.35 |
| CDY05917 | Canola | mitochondrion, nucleus | 15.56 | 18.32 |
| CDY39505 | Canola | cytosol | 12.88 | 18.23 |
| CDX83468 | Canola | plasma membrane | 17.89 | 18.15 |
| CDY05931 | Canola | nucleus | 11.27 | 17.9 |
| CDX86983 | Canola | nucleus | 15.21 | 17.89 |
| Zm00001d038395_P005 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 20.75 | 17.85 |
| CDY00196 | Canola | nucleus | 15.03 | 17.68 |
| CDY44247 | Canola | nucleus | 17.17 | 17.27 |
| CDX79809 | Canola | nucleus | 17.89 | 16.72 |
| CDY05918 | Canola | mitochondrion | 9.12 | 16.24 |
| CDY66694 | Canola | nucleus | 17.35 | 16.19 |
| CDX72934 | Canola | nucleus, plastid | 1.43 | 7.84 |
| CDX96426 | Canola | nucleus, plastid | 1.43 | 7.84 |
Protein Annotations
| EnsemblPlants:CDY22198 | EnsemblPlantsGene:GSBRNA2T00018616001 | Gene3D:1.10.287.110 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000048 | InterPro:IPR036869 | InterPro:IQ_motif_EF-hand-BS | InterPro:J_dom_sf | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF28 |
| PFAM:PF00612 | PFscan:PS50096 | ProteinID:CDY22198 | ProteinID:CDY22198.1 | SEG:seg | SMART:SM00015 |
| SUPFAM:SSF46565 | UniParc:UPI0004EF4B0D | UniProt:A0A078GBX9 | MapMan:23.2.3.2 | : | : |
Description
BnaC01g39030DBnaC01g39030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBX9]
Coordinates
chrLK032128:-:509621..512957
Molecular Weight (calculated)
62275.5 Da
IEP (calculated)
11.034
GRAVY (calculated)
-0.862
Length
559 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKKAKWLKN VKKAFSQDLK KLKHKSVEYQ NSEISYPVLV ASSRSSPPQF EVRVDKVKRK KNLFPPPPPL PPPPEEEEEE DVIVDSPPSS PEFVPPAAKP
101: DRFPGKSREE AAAIFIQSTF RGHLARRESQ GIRRFARLKL LMEGPVVQRQ AAHTLKCMQT LTRVQSQIRS RRIRMSEENQ ARHKQLLHKH AKELGGLKSG
201: GNWNDSNQSK EQIEAGLLNK YEATMRRERA LAYAFTHQQH LKGNMRSGNT MFMDPSNPTW GWSWLERWMA DKPWESSEKV QSKNEKSSVK TLTNRNSHGL
301: ETTKPSTRKK INSLTQPNVP PSSSTSTIKN PRKSKPIPPS IKSKTTDEIT KSSEKNRKHN IARSAVSDDE GLSSSTARRR NMVPTKPTRG KVKAQSSSGV
401: AAATTTATTE EKNGVVPEKA PAKKRVTPAP KARRSSAPPK VENSNLKKVA PILAGVAVAA AAYAGKYGIE AWQAFKARPP RPKLRKFYEG GFQAAMTRRE
501: AALILGVRES VAAEKVKEAH RRVMVANHPD AGGSHYLASK INEAKDMMLG KSESYGSPF
101: DRFPGKSREE AAAIFIQSTF RGHLARRESQ GIRRFARLKL LMEGPVVQRQ AAHTLKCMQT LTRVQSQIRS RRIRMSEENQ ARHKQLLHKH AKELGGLKSG
201: GNWNDSNQSK EQIEAGLLNK YEATMRRERA LAYAFTHQQH LKGNMRSGNT MFMDPSNPTW GWSWLERWMA DKPWESSEKV QSKNEKSSVK TLTNRNSHGL
301: ETTKPSTRKK INSLTQPNVP PSSSTSTIKN PRKSKPIPPS IKSKTTDEIT KSSEKNRKHN IARSAVSDDE GLSSSTARRR NMVPTKPTRG KVKAQSSSGV
401: AAATTTATTE EKNGVVPEKA PAKKRVTPAP KARRSSAPPK VENSNLKKVA PILAGVAVAA AAYAGKYGIE AWQAFKARPP RPKLRKFYEG GFQAAMTRRE
501: AALILGVRES VAAEKVKEAH RRVMVANHPD AGGSHYLASK INEAKDMMLG KSESYGSPF
001: MVKKAKWLKN VKKAFSPDSK KLKHESVECQ DSVISYPVLI ATSRSSSPQF EVRVDEVNYE QKKNLYPPSS DSVTATVAHV LVDSPPSSPE SVHQAIVVNR
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP
Arabidopsis Description
IQD1IQ-domain 1 [Source:UniProtKB/TrEMBL;Acc:F4J1A4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.