Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23391 | Canola | cytosol | 85.33 | 83.3 |
| Bra037689.1-P | Field mustard | cytosol | 96.67 | 82.54 |
| CDX71881 | Canola | nucleus | 64.22 | 58.5 |
| CDY66694 | Canola | nucleus | 77.33 | 58.1 |
| CDY05984 | Canola | nucleus | 63.78 | 57.98 |
| CDX79809 | Canola | nucleus | 76.89 | 57.86 |
| CDY44247 | Canola | nucleus | 69.78 | 56.47 |
| CDX83468 | Canola | plasma membrane | 69.11 | 56.44 |
| AT2G43680.1 | Thale cress | nucleus | 76.44 | 51.42 |
| KRH50198 | Soybean | cytosol | 55.33 | 46.72 |
| KRH71267 | Soybean | cytosol | 54.44 | 45.79 |
| Solyc08g014280.2.1 | Tomato | cytosol | 51.78 | 43.23 |
| PGSC0003DMT400041427 | Potato | cytosol | 50.67 | 42.62 |
| VIT_05s0094g00530.t01 | Wine grape | cytosol | 54.67 | 41.14 |
| Solyc06g053450.2.1 | Tomato | nucleus | 49.11 | 37.33 |
| GSMUA_Achr8P32220_001 | Banana | cytosol | 35.11 | 36.16 |
| PGSC0003DMT400042121 | Potato | cytosol, mitochondrion | 48.0 | 35.01 |
| GSMUA_Achr7P02870_001 | Banana | mitochondrion | 22.67 | 33.89 |
| Os01t0896200-01 | Rice | mitochondrion | 22.89 | 30.56 |
| EES01898 | Sorghum | cytosol | 38.0 | 30.37 |
| Zm00001d012167_P001 | Maize | cytosol | 37.33 | 29.07 |
| CDY11238 | Canola | cytosol, plastid | 25.78 | 28.09 |
| CDX80849 | Canola | cytosol, plastid | 25.78 | 27.23 |
| CDX96427 | Canola | cytosol | 14.22 | 26.34 |
| HORVU3Hr1G089690.1 | Barley | cytosol | 35.78 | 25.64 |
| CDY55696 | Canola | nucleus, plastid | 24.89 | 25.63 |
| CDY04876 | Canola | nucleus, plastid | 25.33 | 25.62 |
| TraesCS3D01G392900.1 | Wheat | cytosol | 35.33 | 25.56 |
| CDX72935 | Canola | cytosol | 14.89 | 25.48 |
| TraesCS3B01G431200.1 | Wheat | cytosol | 35.33 | 25.4 |
| CDY10410 | Canola | cytosol, plastid | 24.89 | 25.23 |
| TraesCS3A01G398900.1 | Wheat | cytosol | 34.67 | 25.04 |
| CDY17214 | Canola | cytosol, plastid | 14.22 | 24.15 |
| CDX95328 | Canola | cytosol | 23.78 | 24.04 |
| CDY23202 | Canola | cytosol | 23.78 | 24.04 |
| CDY32322 | Canola | cytosol, plastid | 13.78 | 23.94 |
| CDY27925 | Canola | plastid | 14.0 | 23.77 |
| CDX70333 | Canola | cytosol | 24.89 | 23.33 |
| CDY20099 | Canola | cytosol | 13.56 | 23.11 |
| CDY08131 | Canola | nucleus | 17.11 | 22.38 |
| CDY62768 | Canola | cytosol | 13.56 | 22.02 |
| CDY05931 | Canola | nucleus | 17.11 | 21.88 |
| CDY38525 | Canola | cytosol | 20.0 | 21.79 |
| CDX77034 | Canola | cytosol | 19.11 | 21.72 |
| CDY35313 | Canola | nucleus | 19.11 | 21.66 |
| CDY05111 | Canola | nucleus | 20.44 | 21.45 |
| CDY10618 | Canola | cytosol | 19.11 | 21.18 |
| CDY15200 | Canola | nucleus | 24.0 | 21.14 |
| CDX90766 | Canola | nucleus | 20.22 | 21.11 |
| CDX92933 | Canola | cytosol, plastid | 18.67 | 20.95 |
| CDX90011 | Canola | nucleus | 23.56 | 20.87 |
| CDY24286 | Canola | cytosol | 18.67 | 20.79 |
| CDY37387 | Canola | cytosol | 17.56 | 20.57 |
| CDX83237 | Canola | cytosol | 22.89 | 20.32 |
| CDY26241 | Canola | nucleus | 16.89 | 20.27 |
| CDY48305 | Canola | nucleus | 16.89 | 20.27 |
| CDX86983 | Canola | nucleus | 20.67 | 19.58 |
| CDY00196 | Canola | nucleus | 20.22 | 19.16 |
| CDX91859 | Canola | mitochondrion, nucleus | 22.22 | 18.87 |
| CDY05917 | Canola | mitochondrion, nucleus | 19.78 | 18.74 |
| CDY39505 | Canola | cytosol | 16.44 | 18.73 |
| CDY69140 | Canola | mitochondrion, nucleus | 21.78 | 18.67 |
| CDY08120 | Canola | mitochondrion, nucleus | 19.11 | 18.14 |
| CDY58749 | Canola | cytosol | 17.11 | 16.89 |
| CDX73992 | Canola | nucleus | 17.78 | 16.77 |
| CDX96426 | Canola | nucleus, plastid | 3.78 | 16.67 |
| CDX72934 | Canola | nucleus, plastid | 3.78 | 16.67 |
| CDY07937 | Canola | nucleus | 17.33 | 16.32 |
| CDY22198 | Canola | cytosol | 19.78 | 15.92 |
| CDY41307 | Canola | cytosol | 19.11 | 15.72 |
| CDX92931 | Canola | mitochondrion, nucleus | 8.67 | 15.29 |
| CDY05918 | Canola | mitochondrion | 10.22 | 14.65 |
| CDY24282 | Canola | mitochondrion | 9.33 | 13.77 |
Protein Annotations
| EnsemblPlants:CDY30433 | EnsemblPlantsGene:GSBRNA2T00045133001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF18 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDY30433 | ProteinID:CDY30433.1 | SEG:seg | SMART:SM00015 |
| UniParc:UPI0004EE4942 | UniProt:A0A078H0T4 | MapMan:20.6.2 | : | : | : |
Description
BnaA04g25340DBnaA04g25340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0T4]
Coordinates
chrLK032253:+:255450..257217
Molecular Weight (calculated)
49968.9 Da
IEP (calculated)
11.209
GRAVY (calculated)
-0.798
Length
450 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKGSLFSA IKSVFTPQSK EKLGNEAERK SGKEKSKKKG FGKLRRGESS SFLPIFREPS SIEKILAEAE RDHNLVFRPP TPPDQSNPPS ASPPPPLRPA
101: SPHSPLKPGV LSPKPTSPRV PPPRAEPLTL DTPRTTTPKP LSPRAELREE IVSRPEPTLF VQHASATKIQ AAFRGYTARR SFRALKGLVR LQGIVKGYSV
201: KRQTVNAMKY MQKLVRVQSK IQSHRIRTSE NQTQVEKDAV NDHWDDSVLT KEERDARSQR KADAIIKRER SMAYAYSHKV TPKSAHDVGL PLWWNWGDQQ
301: LPLASPAPSH YMLTPIRLSP RYSRGRLRGG SPFKDDDSLT SCPPFPSYMA PTLSAKAKVR PNSNPKERVM GTPSSVSSEK RRVSYPQAQR GQDVFRWNKG
401: SLLMSNKGGP GSSSPGGVVV LEKRKTVKSV GNLSVDSTVS MSSKPFNRYV
101: SPHSPLKPGV LSPKPTSPRV PPPRAEPLTL DTPRTTTPKP LSPRAELREE IVSRPEPTLF VQHASATKIQ AAFRGYTARR SFRALKGLVR LQGIVKGYSV
201: KRQTVNAMKY MQKLVRVQSK IQSHRIRTSE NQTQVEKDAV NDHWDDSVLT KEERDARSQR KADAIIKRER SMAYAYSHKV TPKSAHDVGL PLWWNWGDQQ
301: LPLASPAPSH YMLTPIRLSP RYSRGRLRGG SPFKDDDSLT SCPPFPSYMA PTLSAKAKVR PNSNPKERVM GTPSSVSSEK RRVSYPQAQR GQDVFRWNKG
401: SLLMSNKGGP GSSSPGGVVV LEKRKTVKSV GNLSVDSTVS MSSKPFNRYV
001: MVKKGSWFSA IKRVFTPHSK EKLANQEPER KSGKEKKKKG FGKLRHGETN SFLPIFREPS SIEKILGEAE RDHNLVFRPP TPDRPNPYSA SPPPRPASPR
101: VASPRPTSPR VASPRVPSPR AEVPRTLSPK PPSPRAEVPR SLSPKPPSPR ADLPRSLSPK PFDRSKPSSA SANAPPTLRP ASTRVPSQRI TPHSVPSPRP
201: SSPRGASPQA ISSKPPSPRA EPPTLDTPRP PSPRAASLRA DPPRLDAARP TTPRPPSPLA DAPRLDAPRP TTPKPPSPRS DPPRLDAPRP TTPKPPSPRS
301: VSPRAVQRRE IVYRPEPTLP VQHASATKIQ GAFRGYMARK SFRALKGLVR LQGVVRGYSV KRQTINAMKY MQQVVRVQSQ IQSRRIKMLE NQAQVEKDEA
401: KWAASEAGND NWDDSVLTKE ERDSRSQRKT DAIIKRERSM AYAYSRKLWK NSPKSTQDNR SFPQWWNWVD RQNPLASPAP SYSQPQRDFR LTPSRLCPSP
501: LSQSSKQHHI RLDNHFDTST PRSSRSTFHT PSRPIHTGTS RYSRGRLRGQ DSPFKDDDSL TSCPPFPSYM APTVSAKAKV RPNSNPKERV MGTPVSEKRR
601: MSYPPTQDTF RWNKGSLVMS NSSSHRGPGS PGGVVLEKHK TLKSVGNLSI GSTASMATTV GRKEFNRFV
101: VASPRPTSPR VASPRVPSPR AEVPRTLSPK PPSPRAEVPR SLSPKPPSPR ADLPRSLSPK PFDRSKPSSA SANAPPTLRP ASTRVPSQRI TPHSVPSPRP
201: SSPRGASPQA ISSKPPSPRA EPPTLDTPRP PSPRAASLRA DPPRLDAARP TTPRPPSPLA DAPRLDAPRP TTPKPPSPRS DPPRLDAPRP TTPKPPSPRS
301: VSPRAVQRRE IVYRPEPTLP VQHASATKIQ GAFRGYMARK SFRALKGLVR LQGVVRGYSV KRQTINAMKY MQQVVRVQSQ IQSRRIKMLE NQAQVEKDEA
401: KWAASEAGND NWDDSVLTKE ERDSRSQRKT DAIIKRERSM AYAYSRKLWK NSPKSTQDNR SFPQWWNWVD RQNPLASPAP SYSQPQRDFR LTPSRLCPSP
501: LSQSSKQHHI RLDNHFDTST PRSSRSTFHT PSRPIHTGTS RYSRGRLRGQ DSPFKDDDSL TSCPPFPSYM APTVSAKAKV RPNSNPKERV MGTPVSEKRR
601: MSYPPTQDTF RWNKGSLVMS NSSSHRGPGS PGGVVLEKHK TLKSVGNLSI GSTASMATTV GRKEFNRFV
Arabidopsis Description
IQD14IQD14 [Source:UniProtKB/TrEMBL;Acc:A0A178VRE6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.