Factsheet for PGSC0003DMT400042121

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g053450.2.1	Tomato	nucleus	91.41	95.27
PGSC0003DMT400041427	Potato	cytosol	53.16	61.31
KRH50198	Soybean	cytosol	45.06	52.16
KRH71267	Soybean	cytosol	45.22	52.15
CDY05984	Canola	nucleus	39.87	49.7
Bra007471.1-P	Field mustard	nucleus	39.87	49.6
VIT_05s0094g00530.t01	Wine grape	cytosol	47.65	49.16
CDX71881	Canola	nucleus	39.06	48.79
CDY30433	Canola	cytosol	35.01	48.0
AT3G59690.2	Thale cress	nucleus	39.71	47.39
CDY23391	Canola	cytosol	34.04	45.55
Bra037689.1-P	Field mustard	cytosol	35.98	42.13
CDX79809	Canola	nucleus	40.52	41.81
CDY66694	Canola	nucleus	40.36	41.57
GSMUA_Achr7P02870_001	Banana	mitochondrion	19.94	40.86
Bra004776.1-P	Field mustard	nucleus	40.68	40.16
GSMUA_Achr8P32220_001	Banana	cytosol	28.36	40.05
Bra000318.1-P	Field mustard	nucleus	38.09	39.5
CDY44247	Canola	nucleus	35.49	39.39
CDX83468	Canola	plasma membrane	35.17	39.38
AT2G43680.1	Thale cress	nucleus	42.14	38.86
Os01t0896200-01	Rice	mitochondrion	17.67	32.34
EES01898	Sorghum	cytosol	28.53	31.26
Zm00001d012167_P001	Maize	cytosol	27.71	29.58
PGSC0003DMT400004433	Potato	cytosol	23.01	29.58
PGSC0003DMT400010610	Potato	nucleus	21.39	28.7
PGSC0003DMT400027139	Potato	cytosol	22.04	28.27
TraesCS3B01G431200.1	Wheat	cytosol	27.39	27.0
PGSC0003DMT400045333	Potato	cytosol	20.58	26.96
TraesCS3D01G392900.1	Wheat	cytosol	27.07	26.85
TraesCS3A01G398900.1	Wheat	cytosol	27.07	26.81
PGSC0003DMT400039646	Potato	mitochondrion	12.8	26.69
HORVU3Hr1G089690.1	Barley	cytosol	26.74	26.27
PGSC0003DMT400023467	Potato	nucleus	18.15	23.88
PGSC0003DMT400068456	Potato	cytosol	11.67	23.68
PGSC0003DMT400059119	Potato	cytosol	10.86	21.75
PGSC0003DMT400050471	Potato	cytosol	14.26	21.62
PGSC0003DMT400021183	Potato	cytosol	13.78	19.59
PGSC0003DMT400029325	Potato	mitochondrion	9.89	18.37
PGSC0003DMT400031576	Potato	nucleus	14.75	18.35
PGSC0003DMT400006376	Potato	cytosol	11.83	17.1
PGSC0003DMT400038175	Potato	cytosol	12.32	14.7

Protein Annotations

EnsemblPlants:PGSC0003DMT400042121	EnsemblPlantsGene:PGSC0003DMG401016333	EntrezGene:102600587	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295	PANTHER:PTHR32295:SF18	PFAM:PF00612
PFscan:PS50096	PGSC:PGSC0003DMG401016333	RefSeq:XP_006350705.1	SEG:seg	UniParc:UPI00029535F9	UniProt:M1BCJ3
MapMan:20.6.2	:	:	:	:	:

Description

Protein IQ-DOMAIN 14 [Source:PGSC_GENE;Acc:PGSC0003DMG401016333]

Coordinates

chr6:+:39236456..39244457

Molecular Weight (calculated)

67900.2 Da

IEP (calculated)

11.370

GRAVY (calculated)

-0.828

Length

617 amino acids

Sequence
(BLAST)

001: MGKKGSWFYA LKRVFTCNSK KKSAYGSGKK TAKEKKKGRR ILRHGEFKSF LFREPSSIEK ILGEVDDQNL LVRPPTSEQS GIPSAFPVTP TSPRINSPRD
101: ASPRTSYRAT SPGATSPRIA SPRAASPRVI SSKAASPKVS PPKEASPKAT SPRAASPKAT SPRAASPKVT SPREASPKAA SASAPSLKAL SPREASPKAT
201: SASAPSPKAT APREASPRVS SPRSTYPELS RNHNEISYAN GPEPTLTLQL SATKIQAAYR SYMARRGFKS LSGLARLQGV VRSRSVKRQT VNAMKQMQLL
301: GRVQMQIQSR RSQMFQALHS QAYMNDKEAE STLSKWTQLT EAGNHDDWNN SMLTKDEVEA RRREKVEAVI KRERAMSYAC SHQLWRSNPK SATDIRTSGI
401: PWWWNWLNHQ LLPGNDSESQ SAVKDVHSTP SRAISEHKPS PWRLSQNFRH LHLDYDSHES VTPRSTKSAV PLRGKLIHTP RRTSSPMSSS SVSKYSRRRA
501: SAADSPFNHS MKDDDSLMSC PPFSGPSYMS PTISAKAKFR GKTILEERNI GTPSNSSRRR LSFPLTPSST GSVKWNKGSG KDAASLKEHE SMGDHMSVHS
601: TGSTPTVVGR KPFQRFV

Best Arabidopsis Sequence Match ( AT2G43680.1 )
(BLAST)

001: MVKKGSWFSA IKRVFTPHSK EKLANQEPER KSGKEKKKKG FGKLRHGETN SFLPIFREPS SIEKILGEAE RDHNLVFRPP TPDRPNPYSA SPPPRPASPR
101: VASPRPTSPR VASPRVPSPR AEVPRTLSPK PPSPRAEVPR SLSPKPPSPR ADLPRSLSPK PFDRSKPSSA SANAPPTLRP ASTRVPSQRI TPHSVPSPRP
201: SSPRGASPQA ISSKPPSPRA EPPTLDTPRP PSPRAASLRA DPPRLDAARP TTPRPPSPLA DAPRLDAPRP TTPKPPSPRS DPPRLDAPRP TTPKPPSPRS
301: VSPRAVQRRE IVYRPEPTLP VQHASATKIQ GAFRGYMARK SFRALKGLVR LQGVVRGYSV KRQTINAMKY MQQVVRVQSQ IQSRRIKMLE NQAQVEKDEA
401: KWAASEAGND NWDDSVLTKE ERDSRSQRKT DAIIKRERSM AYAYSRKLWK NSPKSTQDNR SFPQWWNWVD RQNPLASPAP SYSQPQRDFR LTPSRLCPSP
501: LSQSSKQHHI RLDNHFDTST PRSSRSTFHT PSRPIHTGTS RYSRGRLRGQ DSPFKDDDSL TSCPPFPSYM APTVSAKAKV RPNSNPKERV MGTPVSEKRR
601: MSYPPTQDTF RWNKGSLVMS NSSSHRGPGS PGGVVLEKHK TLKSVGNLSI GSTASMATTV GRKEFNRFV

Arabidopsis Description

IQD14IQD14 [Source:UniProtKB/TrEMBL;Acc:A0A178VRE6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.