Factsheet for Bra004776.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79809	Canola	nucleus	94.24	98.5
Bra000318.1-P	Field mustard	nucleus	71.04	74.62
AT2G43680.1	Thale cress	nucleus	79.68	74.44
Bra037689.1-P	Field mustard	cytosol	62.56	74.19
Bra007471.1-P	Field mustard	nucleus	53.12	66.94
KRH50198	Soybean	cytosol	45.28	53.1
KRH71267	Soybean	cytosol	44.0	51.4
Solyc08g014280.2.1	Tomato	cytosol	40.64	47.12
PGSC0003DMT400041427	Potato	cytosol	40.0	46.73
VIT_05s0094g00530.t01	Wine grape	cytosol	44.64	46.66
Solyc06g053450.2.1	Tomato	nucleus	39.52	41.72
PGSC0003DMT400042121	Potato	cytosol, mitochondrion	40.16	40.68
GSMUA_Achr7P02870_001	Banana	mitochondrion	17.92	37.21
GSMUA_Achr8P32220_001	Banana	cytosol	25.76	36.84
Os01t0896200-01	Rice	mitochondrion	17.92	33.23
EES01898	Sorghum	cytosol	28.96	32.15
Zm00001d012167_P001	Maize	cytosol	28.48	30.8
Bra028854.1-P	Field mustard	nucleus, plastid	20.16	28.31
HORVU3Hr1G089690.1	Barley	cytosol	28.16	28.03
TraesCS3D01G392900.1	Wheat	cytosol	27.84	27.97
TraesCS3A01G398900.1	Wheat	cytosol	27.84	27.93
TraesCS3B01G431200.1	Wheat	cytosol	27.84	27.8
Bra005462.1-P	Field mustard	cytosol, plastid	11.36	26.79
Bra009554.1-P	Field mustard	cytosol	19.2	25.48
Bra033443.1-P	Field mustard	cytosol	17.92	25.17
Bra017988.1-P	Field mustard	nucleus	13.44	24.0
Bra021888.1-P	Field mustard	plastid	9.44	22.78
Bra000717.1-P	Field mustard	nucleus	15.52	22.45
Bra021588.1-P	Field mustard	cytosol, plastid	9.44	22.35
Bra034081.1-P	Field mustard	nucleus	15.36	21.62
Bra031331.1-P	Field mustard	cytosol	13.28	21.61
Bra034294.1-P	Field mustard	nucleus	13.6	21.41
Bra033284.1-P	Field mustard	nucleus	17.76	21.1
Bra000930.1-P	Field mustard	mitochondrion, nucleus	17.28	20.57
Bra019589.1-P	Field mustard	nucleus	15.52	20.42
Bra025971.1-P	Field mustard	nucleus	12.16	20.27
Bra016042.1-P	Field mustard	cytosol	13.28	20.15
Bra017997.1-P	Field mustard	nucleus, plastid	15.2	20.0
Bra001855.1-P	Field mustard	cytosol	10.72	19.53
Bra023846.1-P	Field mustard	cytosol	12.16	18.23
Bra001299.1-P	Field mustard	nucleus	13.28	17.55

Protein Annotations

EnsemblPlants:Bra004776.1	EnsemblPlants:Bra004776.1-P	EnsemblPlantsGene:Bra004776	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295
PANTHER:PTHR32295:SF18	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	PRINTS:PR01217	SEG:seg
SMART:SM00015	UniParc:UPI0002547B71	UniProt:M4CKP1	MapMan:20.6.2	:	:

Description

AT2G43680 (E=1e-141) IQD14 | IQD14; calmodulin binding

Coordinates

chrA05:+:1792544..1796957

Molecular Weight (calculated)

68946.1 Da

IEP (calculated)

11.989

GRAVY (calculated)

-0.996

Length

625 amino acids

Sequence
(BLAST)

001: MGKKGSWFSA IKRVFTPHSK EKLGNEAERK NVKEKRKKGF GKLRRGEPSS IEKIFGEAER DHNLFFRPST PPPDPDRSNP PSYSPPPLRP ASPQLPSPRV
101: ASPRAASPKP LPPPRADLPR LDSPKPSEPS SASASAPPPP LKPASTRVPS QRITPPIVPS PRPTSPRVVS PQAVPQKLPS PRADPLRLNN PRPSSPKPPS
201: PRADPPRLDS PRPPSPGAEP PRLDAPRPTT PRPPSPRADP PRLDAPRPIT PRPPSPRPVS PRPVQRREIV SRPEPTLLVQ HASARKIQAA FRGYMARRSF
301: RALKGLVRLQ GVVRGHSVKR QTVNAMKYMQ QLVRVQSQIQ SRRIKTLENK AQAERDEAKW AAASEAGNGN WDDSVLTKEE RDARSQRKTD AVIKRERSMA
401: YAYSHKLWKN SPKSAASTGG LPLWWNWMDR QLPLASPAPS HRDYRLTPTR LSPSPLSHHF RHDSNFDTST PKSSRSTLLT PSRPIRTGTS RYSRGRGQDS
501: PFTDNDSLTS CPPLPSYMAP TVSARAKVRP SSNPKERVMG TPSSVGSERR RMSYPPTQQG MDTFRWNKGS LVMSNSGSQR GGGGPGSPGG VVLEKHKTLK
601: SVGNLSIGSS NVSMPDGRKR FNRYV

Best Arabidopsis Sequence Match ( AT2G43680.5 )
(BLAST)

001: MVKKGSWFSA IKRVFTPHSK EKLANEPERK SGKEKKKKGF GKLRHGETNS FLPIFREPSS IEKILGEAER DHNLVFRPPT PDRPNPYSAS PPPRPASPRV
101: ASPRPTSPRV ASPRVPSPRA EVPRTLSPKP PSPRAEVPRS LSPKPPSPRA DLPRSLSPKP FDRSKPSSAS ANAPPTLRPA STRVPSQRIT PHSVPSPRPS
201: SPRGASPQAI SSKPPSPRAE PPTLDTPRPP SPRAASLRAD PPRLDAARPT TPRPPSPLAD APRLDAPRPT TPKPPSPRSD PPRLDAPRPT TPKPPSPRSV
301: SPRAVQRREI VYRPEPTLPV QHASATKIQG AFRGYMARKS FRALKGLVRL QGVVRGYSVK RQTINAMKYM QQVVRVQSQI QSRRIKMLEN QAQVEKDEAK
401: WAASEAGNDN WDDSVLTKEE RDSRSQRKTD AIIKRERSMA YAYSRKLWKN SPKSTQDNRS FPQWWNWVDR QNPLASPAPS YSQPQRDFRL TPSRLCPSPL
501: SQSSKQHHIR LDNHFDTSTP RSSRSTFHTP SRPIHTGTSR YSRGRLRGQD SPFKDDDSLT SCPPFPSYMA PTVSAKAKVR PNSNPKERVM GTPVSEKRRM
601: SYPPTQDTFR WNKGSLVMSN SSSHRGPGSP GGVVLEKHKT LKSVGNLSIG STASMATTVG RKEFNRFV

Arabidopsis Description

IQD14IQD14 [Source:UniProtKB/TrEMBL;Acc:A0A178VRE6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.