CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71267	Soybean	cytosol	95.5	95.14
VIT_05s0094g00530.t01	Wine grape	cytosol	66.42	59.2
CDY05984	Canola	nucleus	54.22	58.38
Bra007471.1-P	Field mustard	nucleus	54.22	58.27
Solyc08g014280.2.1	Tomato	cytosol	58.91	58.26
PGSC0003DMT400041427	Potato	cytosol	58.35	58.13
CDX71881	Canola	nucleus	53.47	57.69
AT3G59690.2	Thale cress	nucleus	54.22	55.9
CDY30433	Canola	cytosol	46.72	55.33
CDY23391	Canola	cytosol	46.53	53.8
Bra037689.1-P	Field mustard	cytosol	47.47	48.01
CDX79809	Canola	nucleus	52.91	47.16
CDX83468	Canola	plasma membrane	48.59	47.01
GSMUA_Achr8P32220_001	Banana	cytosol	38.46	46.91
CDY44247	Canola	nucleus	48.78	46.76
CDY66694	Canola	nucleus	52.53	46.74
Bra000318.1-P	Field mustard	nucleus	51.78	46.39
Solyc06g053450.2.1	Tomato	nucleus	50.84	45.78
Bra004776.1-P	Field mustard	nucleus	53.1	45.28
GSMUA_Achr7P02870_001	Banana	mitochondrion	25.52	45.18
PGSC0003DMT400042121	Potato	cytosol, mitochondrion	52.16	45.06
AT2G43680.1	Thale cress	nucleus	55.16	43.95
Os01t0896200-01	Rice	mitochondrion	23.26	36.8
EES01898	Sorghum	cytosol	38.65	36.59
Zm00001d012167_P001	Maize	cytosol	37.34	34.43
KRH32840	Soybean	mitochondrion, nucleus	8.26	33.33
KRH57858	Soybean	cytosol	27.77	32.6
KRG95941	Soybean	nucleus	28.71	32.08
KRH67648	Soybean	nucleus	28.33	31.66
KRH32420	Soybean	cytosol	27.95	31.43
KRH19825	Soybean	cytosol	27.58	31.28
KRH04761	Soybean	cytosol	28.14	31.06
TraesCS3D01G392900.1	Wheat	cytosol	35.83	30.71
TraesCS3B01G431200.1	Wheat	cytosol	35.83	30.51
TraesCS3A01G398900.1	Wheat	cytosol	35.65	30.5
HORVU3Hr1G089690.1	Barley	cytosol	35.83	30.41
KRH34906	Soybean	cytosol	25.33	27.95
KRG91856	Soybean	cytosol	25.33	27.61
KRH20344	Soybean	cytosol	15.2	27.27
KRH50151	Soybean	cytosol	14.63	26.9
KRH21320	Soybean	cytosol	14.82	26.42
KRH10977	Soybean	cytosol	14.82	25.65
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	21.76	25.33
KRH27315	Soybean	cytosol	13.88	25.17
KRH53505	Soybean	cytosol	21.01	25.11
KRH64435	Soybean	nucleus	21.76	25.05
KRH22612	Soybean	cytosol	19.51	24.47
KRH26707	Soybean	cytosol	18.76	23.7
KRH55128	Soybean	mitochondrion, nucleus	13.13	23.65
KRH06386	Soybean	mitochondrion, nucleus	23.26	22.55
KRH47821	Soybean	nucleus	23.08	22.53
KRH15576	Soybean	cytosol	17.26	22.06
KRH05433	Soybean	cytosol	17.07	22.03
KRH39086	Soybean	cytosol	17.45	21.43
KRH61522	Soybean	cytosol	18.01	21.33
KRH37691	Soybean	mitochondrion	7.13	20.99
KRH22000	Soybean	plastid	13.32	20.7
KRH52206	Soybean	cytosol	17.45	20.67
KRH23285	Soybean	nucleus	15.57	20.15
KRH10035	Soybean	cytosol	15.57	19.95
KRH44124	Soybean	mitochondrion	14.45	18.29
KRH47099	Soybean	cytosol	14.45	16.7

Protein Annotations

Gene3D:1.20.5.190	EntrezGene:100807777	MapMan:20.6.2	EMBL:ACUP02004669	InterPro:DUF4005	EnsemblPlantsGene:GLYMA_07G207300
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	UniProt:K7L2W8
EnsemblPlants:KRH50198	ProteinID:KRH50198	ProteinID:KRH50198.1	ProteinID:KRH50199.1	PFAM:PF00612	PFAM:PF13178
PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF18	SMART:SM00015	UniParc:UPI0002338203	SEG:seg

Description

hypothetical protein

Coordinates

chr7:-:37658857..37662661

Molecular Weight (calculated)

59686.8 Da

IEP (calculated)

11.489

GRAVY (calculated)

-0.942

Length

533 amino acids

Sequence
(BLAST)

001: MGKKGSWFSA IKRVFTHHSK GKQDSDNNKG TKEKKKSLGK LKHGEANSFI PLFREPSSIE KIFGDFEREQ QLLGLRPATP PERPKTPPYA PPRAPSPRPP
101: SPRVPSPRPP SPRAASPRAA SPRVTSPKAT SSRIAHHHKE VGHRPEPTLR QQQASATKIQ SVYRGYMARR SFRALKGLVR LQGVVKGQNV KRQTVNAMKH
201: MQLLVRVQCQ IQSRRIQMLE NQARYQADFK NDKDAASILG KLTSEAGNEE WDDSLLTKEE VEARLQRKVE AIIKRERAMA FAYSHQLWKA TPKSTHTPVT
301: DTRSGGFPWW WNWLERQTPA ATPQERQSLK NFQITPPRPY SEQKTSPRPG SSTQRQPQQQ QPHFAFDNMD TPTPKSTKST IVTSSKPART PPFRTPQANG
401: SGSGSRYPRP RGVGSNSPFD VPLKDDDSLT SCPPFSVPNY MAPTLSARAK VRASSNPRER LGGTPTSTDS KRRLSFPLSQ GIGSFKWSKG FSNKDQRIPD
501: KFQSLESIGN VSVDSTVSLP ARVVGRKPFT RFV

Best Arabidopsis Sequence Match ( AT3G59690.1 )
(BLAST)

001: MGKKGSWFSA IKRVFTPHSK EKQLSNNNQE PEIKSENKEK KKKGFGKKLR NGETNSFLPI FRQPSSIEKI LSEAEREHNL VFRPPTPTDR ANSSSTSVAS
101: PLVRPASPKV PSQRYVSSPK PISPRVAYPQ VHYPKPPSPK PPSPRAVSPR IVQRREFVHR PEPSLLVKNA YAIKIQAAFR GYMARRSFRA LKGLVRLQGV
201: VRGHSVKRQT MNAMKYMQLL VRVQTQVQSR RIQMLENRAR NDKDDTKLVS SRMSDDWDDS VLTKEEKDVR LHRKIDAMIK RERSMAYAYS HQLWKNSPKS
301: AQDIRTSGFP LWWNWVDRQK NQNQPFRLTP TRPSLSPQPQ SSNQNHFRLN NSFDTSTPNS SKSTFVTPSR PIHTPQPYSS SVSRYSRGGG RATQDSPFKD
401: DDSLTSCPPF SAPSYMAPTV SAKAKLRANS NPKERMDRTP VSTNEKRRSS FPLGSFKWNK GSLFMSNNSN NKGPGSSSSG AVVLEKHKTL KSVGNLSIDS
501: TVSMPATIGR RAFNRFA

Arabidopsis Description

IQD13IQ-domain 13 [Source:UniProtKB/TrEMBL;Acc:Q9M199]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.