CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50198	Soybean	cytosol	95.14	95.5
VIT_05s0094g00530.t01	Wine grape	cytosol	66.36	59.36
Solyc08g014280.2.1	Tomato	cytosol	59.07	58.63
PGSC0003DMT400041427	Potato	cytosol	58.5	58.5
CDY05984	Canola	nucleus	53.08	57.37
Bra007471.1-P	Field mustard	nucleus	53.08	57.26
CDX71881	Canola	nucleus	52.52	56.88
AT3G59690.2	Thale cress	nucleus	53.46	55.32
CDY30433	Canola	cytosol	45.79	54.44
CDY23391	Canola	cytosol	45.79	53.15
Bra037689.1-P	Field mustard	cytosol	46.54	47.25
GSMUA_Achr8P32220_001	Banana	cytosol	37.94	46.45
Solyc06g053450.2.1	Tomato	nucleus	51.03	46.11
CDX79809	Canola	nucleus	51.4	45.99
CDX83468	Canola	plasma membrane	47.29	45.92
CDY44247	Canola	nucleus	47.48	45.68
CDY66694	Canola	nucleus	50.84	45.41
PGSC0003DMT400042121	Potato	cytosol, mitochondrion	52.15	45.22
Bra000318.1-P	Field mustard	nucleus	50.28	45.21
GSMUA_Achr7P02870_001	Banana	mitochondrion	25.42	45.18
Bra004776.1-P	Field mustard	nucleus	51.4	44.0
AT2G43680.1	Thale cress	nucleus	54.21	43.35
Os01t0896200-01	Rice	mitochondrion	23.36	37.09
EES01898	Sorghum	cytosol	38.5	36.59
Zm00001d012167_P001	Maize	cytosol	37.2	34.43
KRG95941	Soybean	nucleus	29.16	32.7
KRH57858	Soybean	cytosol	27.48	32.38
KRH67648	Soybean	nucleus	28.79	32.29
KRH32840	Soybean	mitochondrion, nucleus	7.85	31.82
KRH32420	Soybean	cytosol	27.48	31.01
KRH19825	Soybean	cytosol	27.1	30.85
KRH04761	Soybean	cytosol	27.85	30.85
TraesCS3D01G392900.1	Wheat	cytosol	35.51	30.55
TraesCS3B01G431200.1	Wheat	cytosol	35.7	30.51
HORVU3Hr1G089690.1	Barley	cytosol	35.7	30.41
TraesCS3A01G398900.1	Wheat	cytosol	35.33	30.34
KRH34906	Soybean	cytosol	26.36	29.19
KRG91856	Soybean	cytosol	26.17	28.63
KRH20344	Soybean	cytosol	14.95	26.94
KRH21320	Soybean	cytosol	14.95	26.76
KRH50151	Soybean	cytosol	14.39	26.55
KRH10977	Soybean	cytosol	15.14	26.3
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	21.31	24.89
KRH27315	Soybean	cytosol	13.64	24.83
KRH22612	Soybean	cytosol	19.63	24.71
KRH53505	Soybean	cytosol	20.56	24.66
KRH64435	Soybean	nucleus	21.31	24.62
KRH26707	Soybean	cytosol	18.88	23.93
KRH55128	Soybean	mitochondrion, nucleus	12.9	23.31
KRH06386	Soybean	mitochondrion, nucleus	23.18	22.55
KRH15576	Soybean	cytosol	17.57	22.54
KRH47821	Soybean	nucleus	22.99	22.53
KRH05433	Soybean	cytosol	17.38	22.52
KRH39086	Soybean	cytosol	17.94	22.12
KRH61522	Soybean	cytosol	18.32	21.78
KRH52206	Soybean	cytosol	17.76	21.11
KRH37691	Soybean	mitochondrion	6.92	20.44
KRH22000	Soybean	plastid	13.08	20.41
KRH10035	Soybean	cytosol	15.7	20.19
KRH23285	Soybean	nucleus	15.51	20.15
KRH44124	Soybean	mitochondrion	14.58	18.53
KRH47099	Soybean	cytosol	14.58	16.92

Protein Annotations

EMBL:ACUP02000881	EnsemblPlants:KRH71267	EnsemblPlantsGene:GLYMA_02G138000	EntrezGene:100814804	Gene3D:1.20.5.190	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295
PANTHER:PTHR32295:SF18	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	ProteinID:KRH71267	ProteinID:KRH71267.1
SEG:seg	SMART:SM00015	UniParc:UPI00023BDA9A	UniProt:I1JF03	MapMan:20.6.2	:

Description

hypothetical protein

Coordinates

chr2:+:14281246..14287485

Molecular Weight (calculated)

60054.3 Da

IEP (calculated)

11.449

GRAVY (calculated)

-0.945

Length

535 amino acids

Sequence
(BLAST)

001: MGKKGSWFSA IKRVFTHHSK GKQDSDNNKG TKEKKKSLGK LKHGETNSFI PLFREPSSIE KIFGDFEREQ QLLGLRPATP PERPKTPPYV PPRAPSPRPP
101: SPRAPSPRPP SPRAASPRVA SPRVTSPKAA SSRIAHHHKE VGYRPEPTLR QQHATATKIQ SVYRGYMARR SFRALKGLVR LQGVVRGQNV KRQTVNAMKH
201: MQLLVRVQSQ IQSRRIQMLE NQARYQADFK NDKDAASILG KLTSEAGNEE WDDSLLTKEE VEARLQRKVE AIIKRERAMA FAYSHQLWKA TPKSTHTPMT
301: DTRSSGFPWW WNWLERQTPA ATPQERQSLK NFQITPPRPY SEQKTSPRPG SSTQRQPQSQ QQQPHVSFDN MDTPTPKSTK STIVASSKPV RMPPFRTPQA
401: NSSGSGSKYP RPRDVGSNSP FDLPLKDDDS LTSCPPFSVP NYMAPTLSAR AKARASSNPR ERLGGTPTST DSKRRLSFPL SQGIGSFKWS KGFSSKDQRV
501: PDKFQSLESI GNVSVDSTVS LPARVVGRKP FTRFV

Best Arabidopsis Sequence Match ( AT3G59690.1 )
(BLAST)

001: MGKKGSWFSA IKRVFTPHSK EKQLSNNNQE PEIKSENKEK KKKGFGKKLR NGETNSFLPI FRQPSSIEKI LSEAEREHNL VFRPPTPTDR ANSSSTSVAS
101: PLVRPASPKV PSQRYVSSPK PISPRVAYPQ VHYPKPPSPK PPSPRAVSPR IVQRREFVHR PEPSLLVKNA YAIKIQAAFR GYMARRSFRA LKGLVRLQGV
201: VRGHSVKRQT MNAMKYMQLL VRVQTQVQSR RIQMLENRAR NDKDDTKLVS SRMSDDWDDS VLTKEEKDVR LHRKIDAMIK RERSMAYAYS HQLWKNSPKS
301: AQDIRTSGFP LWWNWVDRQK NQNQPFRLTP TRPSLSPQPQ SSNQNHFRLN NSFDTSTPNS SKSTFVTPSR PIHTPQPYSS SVSRYSRGGG RATQDSPFKD
401: DDSLTSCPPF SAPSYMAPTV SAKAKLRANS NPKERMDRTP VSTNEKRRSS FPLGSFKWNK GSLFMSNNSN NKGPGSSSSG AVVLEKHKTL KSVGNLSIDS
501: TVSMPATIGR RAFNRFA

Arabidopsis Description

IQD13IQ-domain 13 [Source:UniProtKB/TrEMBL;Acc:Q9M199]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.