CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04761	Soybean	cytosol	92.07	86.54
AT3G52290.1	Thale cress	cytosol	50.0	52.79
KRG95941	Soybean	nucleus	55.07	52.41
KRH67648	Soybean	nucleus	54.85	52.2
KRH34906	Soybean	cytosol	55.07	51.76
KRH19825	Soybean	cytosol	52.42	50.64
KRG91856	Soybean	cytosol	54.19	50.31
Bra033443.1-P	Field mustard	cytosol	49.12	50.11
CDX95328	Canola	cytosol	48.9	49.89
CDY23202	Canola	cytosol	48.9	49.89
KRH32420	Soybean	cytosol	51.76	49.58
KRH50151	Soybean	cytosol	21.37	33.45
KRH32840	Soybean	mitochondrion, nucleus	9.69	33.33
KRH21320	Soybean	cytosol	21.15	32.11
KRH20344	Soybean	cytosol	20.7	31.65
KRH10977	Soybean	cytosol	21.37	31.49
KRH27315	Soybean	cytosol	19.82	30.61
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	30.84	30.57
KRH53505	Soybean	cytosol	29.07	29.6
KRH64435	Soybean	nucleus	30.18	29.59
KRH22612	Soybean	cytosol	26.65	28.47
KRH26707	Soybean	cytosol	26.21	28.2
KRH05433	Soybean	cytosol	25.55	28.09
KRH15576	Soybean	cytosol	25.77	28.06
KRH50198	Soybean	cytosol	32.6	27.77
KRH55128	Soybean	mitochondrion, nucleus	18.06	27.7
KRH71267	Soybean	cytosol	32.38	27.48
KRH39086	Soybean	cytosol	26.21	27.42
KRH22000	Soybean	plastid	20.04	26.53
KRH37691	Soybean	mitochondrion	10.57	26.52
KRH61522	Soybean	cytosol	26.21	26.44
KRH47821	Soybean	nucleus	31.28	26.01
KRH06386	Soybean	mitochondrion, nucleus	31.28	25.82
KRH52206	Soybean	cytosol	25.55	25.78
KRH23285	Soybean	nucleus	22.47	24.76
KRH10035	Soybean	cytosol	21.59	23.56
KRH44124	Soybean	mitochondrion	19.6	21.14
KRH47099	Soybean	cytosol	19.82	19.52

Protein Annotations

EntrezGene:100780294	MapMan:35.1	EMBL:ACUP02003065	ncoils:Coil	EnsemblPlantsGene:GLYMA_05G088800	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	UniProt:K7KNV1	EnsemblPlants:KRH57858
ProteinID:KRH57858	ProteinID:KRH57858.1	ProteinID:KRH57859.1	ProteinID:KRH57860.1	ProteinID:KRH57861.1	PFAM:PF00612
PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF28	SMART:SM00015	UniParc:UPI000233940C	SEG:seg

Description

hypothetical protein

Coordinates

chr5:-:19164759..19170703

Molecular Weight (calculated)

49944.1 Da

IEP (calculated)

11.177

GRAVY (calculated)

-0.807

Length

454 amino acids

Sequence
(BLAST)

001: MGKKGSWFSA VKKVFSSDSK KDKKKQKSHQ SKKASSGKDG EAAVALPPIE DVKLIEAEKE QSKHAASLAF ATAIAAEAAV AAAQAAAKVV RLTSMPHYTG
101: KTKEEIAVIK IQTAFRGYMA RRALRALRGL VRLKTLQGQS VKRQAASTLR SMQTLARLQS QIRESRIRMS EENQALQHQL PQKHEKELEK LRAAVGEEWD
201: DRSQLKEQIE AKLLHRQEAA LRRERALAYS FSHQQTWKGS SKSLNPTFMD PNNPKWGWSW LERWMATRPR DGHSTVVDHN DHASVKSAAS RAMSVGEITK
301: LCSLQDKRPS PFGQKPRRPA PQSSPSKTPS TNGKARPSSS KGSSVWGGDE GSRSMFSVQS ERYRRHSIAG SSVRDDESLA SSPAIPSYMA PTSSAKARSK
401: IIRPSPEKGG DSVFARKRLS FSPSSASRRH SDPPKVEMVS NNDAAAAVSN GRGR

Best Arabidopsis Sequence Match ( AT3G09710.1 )
(BLAST)

001: MVKKAKWLKN VKKAFSPDSK KLKHESVECQ DSVISYPVLI ATSRSSSPQF EVRVDEVNYE QKKNLYPPSS DSVTATVAHV LVDSPPSSPE SVHQAIVVNR
101: FAGKSKEEAA AILIQSTFRG HLARRESQVM RGQERLKLLM EGSVVQRQAA ITLKCMQTLS RVQSQIRSRR IRMSEENQAR HKQLLQKHAK ELGGLKNGGN
201: WNYSNQSKEQ VEAGMLHKYE ATMRRERALA YAFTHQQNLK SFSKTANPMF MDPSNPTWGW SWLERWMAGR PWESSEKEQN TTNNDNSSVK NSTNRNSQGG
301: ETAKSSNRNK LNSSTKPNTP SASSTATRNP RKKRPIPSSI KSKSSDDEAK SSERNRRPSI ARPSVSDDET LSSSTARRSS NLIPTTKSAR GKPKSQTSSR
401: VAVTTSTTEE SSILPEKAPA KKRLSTSASP APKPRRSSAP PKVEKGVLKA ERTP

Arabidopsis Description

IQD1IQ-domain 1 [Source:UniProtKB/TrEMBL;Acc:F4J1A4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.