CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64435	Soybean	nucleus	90.81	87.47
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	65.7	63.97
VIT_16s0098g01790.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	58.3	56.28
PGSC0003DMT400023467	Potato	nucleus	57.17	54.37
Solyc03g083100.2.1	Tomato	nucleus	56.28	53.52
AT3G49260.3	Thale cress	nucleus	52.91	50.0
PGSC0003DMT400050471	Potato	cytosol	44.17	48.4
Solyc06g052010.1.1	Tomato	cytosol	42.83	48.11
CDY05917	Canola	mitochondrion, nucleus	50.9	47.79
Bra017997.1-P	Field mustard	nucleus, plastid	50.67	47.58
CDY08120	Canola	mitochondrion, nucleus	49.33	46.41
CDX86983	Canola	nucleus	48.65	45.68
Bra019589.1-P	Field mustard	nucleus	48.43	45.47
CDY00196	Canola	nucleus	47.98	45.05
GSMUA_Achr10P...	Banana	cytosol	43.95	43.36
CDY05918	Canola	mitochondrion	26.91	38.22
KRH57858	Soybean	cytosol	29.6	29.07
KRH04761	Soybean	cytosol	30.72	28.36
KRG95941	Soybean	nucleus	28.25	26.42
KRH05433	Soybean	cytosol	24.44	26.39
KRH47821	Soybean	nucleus	32.29	26.37
KRH67648	Soybean	nucleus	28.03	26.21
KRH06386	Soybean	mitochondrion, nucleus	32.29	26.18
KRH32420	Soybean	cytosol	27.8	26.16
KRH19825	Soybean	cytosol	27.35	25.96
KRH61522	Soybean	cytosol	25.78	25.56
KRH15576	Soybean	cytosol	23.77	25.42
KRH52206	Soybean	cytosol	25.56	25.33
KRH22612	Soybean	cytosol	23.99	25.18
KRH50151	Soybean	cytosol	16.37	25.17
KRH26707	Soybean	cytosol	23.77	25.12
KRH20344	Soybean	cytosol	16.59	24.92
KRH21320	Soybean	cytosol	16.37	24.41
KRH44124	Soybean	mitochondrion	22.65	23.99
KRH10977	Soybean	cytosol	16.14	23.38
KRH10035	Soybean	cytosol	21.75	23.32
KRH27315	Soybean	cytosol	15.25	23.13
KRH39086	Soybean	cytosol	22.2	22.81
KRH47099	Soybean	cytosol	23.54	22.78
KRH32840	Soybean	mitochondrion, nucleus	6.73	22.73
KRH55128	Soybean	mitochondrion, nucleus	15.02	22.64
KRH23285	Soybean	nucleus	20.85	22.57
KRH34906	Soybean	cytosol	24.44	22.57
KRG91856	Soybean	cytosol	23.99	21.88
KRH50198	Soybean	cytosol	25.11	21.01
KRH71267	Soybean	cytosol	24.66	20.56
KRH22000	Soybean	plastid	14.57	18.95
KRH37691	Soybean	mitochondrion	7.4	18.23

Protein Annotations

Gene3D:1.20.5.190	EntrezGene:100814022	MapMan:35.2	EMBL:ACUP02003469	ncoils:Coil	InterPro:DUF4005
EnsemblPlantsGene:GLYMA_06G129300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	UniProt:I1KAT1	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	EnsemblPlants:KRH53505	ProteinID:KRH53505
ProteinID:KRH53505.1	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	PANTHER:PTHR32295	PANTHER:PTHR32295:SF33
SMART:SM00015	UniParc:UPI00023C389B	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:10625533..10630581

Molecular Weight (calculated)

50128.2 Da

IEP (calculated)

10.153

GRAVY (calculated)

-0.809

Length

446 amino acids

Sequence
(BLAST)

001: MGKKGGSWFS SVKKVFKSSS KDSPVPEKKK ENKEEQWQQH VAPEEVSVEH FPAESSPDVI NEGSATSSTP VTEDRNHAVA FAAATAAAAE AAVAAAQAAA
101: RVVRLAGYGR QPKEERAAIL IQSYYRGYLA RRALRALKGL VRLQALVRGH NVRKQAQMTM RCMHALVRVQ ARVRARRLEL TEEKLQRRVE EQHECPKQFL
201: SPIKMLDMDA SQHIKENHYF RKHEAVMKRE RALAYAFNCQ RQLKQYMHID PNGDDIGCYN TERERPQLDW NWLERWMSSQ QSPNLRPRET LYRTLANATT
301: DDMSEEKTVE MDMAANMGFM NQESYDTSPI SNRYHQRQHS AGIPSYMAPT LSAKAKVRSQ GPQGPFKQRG SPGPHWNSST RRSSAIGLGC DSSSSGGPTS
401: AHVSPRSPNP KINEIRLQSR RISGGSPDNV HIEDWALPLG ATNGWP

Best Arabidopsis Sequence Match ( AT3G49260.1 )
(BLAST)

001: MGKKGSGGWF STVKKKVFKS SPKDSKRENN IGSNNADIWQ QQHDTQEVVS FEHFPAESSP EISHDVESTA STPATNVGDR KHAMAVAIAT AAAAEAAVAA
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H

Arabidopsis Description

iqd21IQ-domain 21 [Source:UniProtKB/TrEMBL;Acc:F4IWT1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.