Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400050471 | Potato | cytosol | 83.88 | 81.82 |
| Solyc03g083100.2.1 | Tomato | nucleus | 54.91 | 46.48 |
| KRH53505 | Soybean | cytosol | 48.11 | 42.83 |
| KRH64435 | Soybean | nucleus | 47.36 | 40.6 |
| KRH16503 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 45.84 | 39.74 |
| VIT_16s0098g01790.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 45.84 | 39.39 |
| AT3G49260.3 | Thale cress | nucleus | 42.57 | 35.81 |
| CDY05917 | Canola | mitochondrion, nucleus | 41.56 | 34.74 |
| CDY00196 | Canola | nucleus | 41.56 | 34.74 |
| Bra017997.1-P | Field mustard | nucleus, plastid | 41.56 | 34.74 |
| GSMUA_Achr10P... | Banana | cytosol | 39.55 | 34.73 |
| Bra019589.1-P | Field mustard | nucleus | 41.31 | 34.53 |
| CDX86983 | Canola | nucleus | 41.06 | 34.32 |
| CDY08120 | Canola | mitochondrion, nucleus | 40.3 | 33.76 |
| Solyc04g050050.2.1 | Tomato | cytosol | 25.94 | 26.14 |
| CDY05918 | Canola | mitochondrion | 20.65 | 26.11 |
| Solyc10g084280.1.1 | Tomato | nucleus | 28.72 | 23.85 |
| Solyc10g086060.1.1 | Tomato | cytosol | 27.71 | 23.35 |
| Solyc08g062940.2.1 | Tomato | cytosol | 18.14 | 23.3 |
| Solyc09g007410.2.1 | Tomato | cytosol | 27.71 | 22.77 |
| Solyc10g005000.2.1 | Tomato | nucleus | 22.17 | 22.34 |
| Solyc08g083240.2.1 | Tomato | nucleus | 26.95 | 21.88 |
| Solyc11g071840.1.1 | Tomato | cytosol | 21.91 | 19.42 |
| Solyc02g077260.2.1 | Tomato | nucleus | 14.61 | 19.21 |
| Solyc03g121760.2.1 | Tomato | cytosol | 19.65 | 18.18 |
| Solyc10g008790.2.1 | Tomato | cytosol | 13.35 | 17.43 |
| Solyc12g014130.1.1 | Tomato | nucleus | 11.34 | 17.24 |
| Solyc01g009340.2.1 | Tomato | nucleus | 16.88 | 16.63 |
| Solyc08g014280.2.1 | Tomato | cytosol | 22.42 | 16.51 |
| Solyc06g053450.2.1 | Tomato | nucleus | 20.15 | 13.51 |
Protein Annotations
| EnsemblPlants:Solyc06g052010.1.1 | EnsemblPlantsGene:Solyc06g052010.1 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF33 | PFAM:PF00612 |
| PFAM:PF13178 | PFscan:PS50096 | SEG:seg | SMART:SM00015 | UniParc:UPI0002767294 | UniProt:K4C5Y7 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:35673238..35677968
Molecular Weight (calculated)
45341.3 Da
IEP (calculated)
10.150
GRAVY (calculated)
-0.922
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKGSGNWF STVKKVFIKP SCKDYLPTDH KKEKLENQWQ HEAREVVSVE KIPAESCSDL TINRESNENS SISSAEDRNH DIHVIEATVA AAEAATYTAP
101: KTIKLDGHNH KSKEEIAATL IQSYYRGYLA RRALRALRGL VKLQALVRGH SVRKQAQMKM RCMQALVRVQ SKVRARRLQL RQSKVVEEVK SRSSIREESL
201: LLNKQETHSI ENTRRKQQVY NAYQKWLHSD LDDEECFGNE HENPQQSWNW LDKWMASQHV VRQEDSSYVS LSITDDISEK TFELGPEDVN LAHQNEKSPY
301: SSTQSNKDSV PSYMAPTKSA KAKIRSPGPI KPKSPPGVAQ WNSTPKKVTA RRWSYDSSAR SPNPKISAKW MATYSPQTRV HDRTSLVGPP AHRYNYN
101: KTIKLDGHNH KSKEEIAATL IQSYYRGYLA RRALRALRGL VKLQALVRGH SVRKQAQMKM RCMQALVRVQ SKVRARRLQL RQSKVVEEVK SRSSIREESL
201: LLNKQETHSI ENTRRKQQVY NAYQKWLHSD LDDEECFGNE HENPQQSWNW LDKWMASQHV VRQEDSSYVS LSITDDISEK TFELGPEDVN LAHQNEKSPY
301: SSTQSNKDSV PSYMAPTKSA KAKIRSPGPI KPKSPPGVAQ WNSTPKKVTA RRWSYDSSAR SPNPKISAKW MATYSPQTRV HDRTSLVGPP AHRYNYN
001: MGKKGSGGWF STVKKKVFKS SPKDSKRENN IGSNNADIWQ QQHDTQEVVS FEHFPAESSP EISHDVESTA STPATNVGDR KHAMAVAIAT AAAAEAAVAA
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H
Arabidopsis Description
iqd21IQ-domain 21 [Source:UniProtKB/TrEMBL;Acc:F4IWT1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.