Factsheet for Bra017997.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 2
vacuole 1
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08120	Canola	mitochondrion, nucleus	97.89	98.1
CDY05918	Canola	mitochondrion	64.21	97.13
AT3G49260.3	Thale cress	nucleus	87.58	88.14
Bra019589.1-P	Field mustard	nucleus	84.21	84.21
KRH53505	Soybean	cytosol	47.58	50.67
VIT_16s0098g01790.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	48.42	49.78
KRH64435	Soybean	nucleus	47.58	48.81
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	46.74	48.47
PGSC0003DMT400023467	Potato	nucleus	45.89	46.48
Solyc03g083100.2.1	Tomato	nucleus	45.68	46.27
Solyc06g052010.1.1	Tomato	cytosol	34.74	41.56
GSMUA_Achr10P...	Banana	cytosol	38.74	40.71
PGSC0003DMT400050471	Potato	cytosol	34.53	40.29
Bra033443.1-P	Field mustard	cytosol	25.47	27.19
Bra034294.1-P	Field mustard	nucleus	22.32	26.7
Bra028854.1-P	Field mustard	nucleus, plastid	24.84	26.52
Bra031331.1-P	Field mustard	cytosol	21.26	26.3
Bra017988.1-P	Field mustard	nucleus	19.16	26.0
Bra025971.1-P	Field mustard	nucleus	20.0	25.33
Bra005462.1-P	Field mustard	cytosol, plastid	13.89	24.91
Bra001855.1-P	Field mustard	cytosol	17.68	24.49
Bra021888.1-P	Field mustard	plastid	13.26	24.32
Bra016042.1-P	Field mustard	cytosol	20.42	23.54
Bra009554.1-P	Field mustard	cytosol	22.74	22.93
Bra021588.1-P	Field mustard	cytosol, plastid	11.58	20.83
Bra000930.1-P	Field mustard	mitochondrion, nucleus	22.95	20.76
Bra023846.1-P	Field mustard	cytosol	18.11	20.62
Bra000717.1-P	Field mustard	nucleus	18.74	20.6
Bra033284.1-P	Field mustard	nucleus	22.74	20.53
Bra007471.1-P	Field mustard	nucleus	21.26	20.36
Bra034081.1-P	Field mustard	nucleus	17.89	19.14
Bra037689.1-P	Field mustard	cytosol	18.95	17.08
Bra001299.1-P	Field mustard	nucleus	16.63	16.7
Bra000318.1-P	Field mustard	nucleus	19.79	15.8
Bra004776.1-P	Field mustard	nucleus	20.0	15.2

Protein Annotations

EnsemblPlants:Bra017997.1	EnsemblPlants:Bra017997.1-P	EnsemblPlantsGene:Bra017997	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR32295
PANTHER:PTHR32295:SF33	PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015
UniParc:UPI000253F222	UniProt:M4DNB0	MapMan:35.2	:	:	:

Description

AT3G49260 (E=2e-172) iqd21 | iqd21 (IQ-domain 21); calmodulin binding

Coordinates

chrA06:-:9385472..9389379

Molecular Weight (calculated)

52808.2 Da

IEP (calculated)

10.428

GRAVY (calculated)

-0.817

Length

475 amino acids

Sequence
(BLAST)

001: MGKKGSGGWF STVKKKVFRS SPKDSKRENN ISNNTAVRWQ QQHDTQEVVS FENFPAESSP EISHDVESTA STPGTTVGER KHAMAVAIAT AAAAEAAVAA
101: AQAAAKVVRL AGYNRQTEED TAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFQEEERR
201: SGMEKPNIGS TNLQTEREKP KKLHEVNRTS LYQTPGKEKE KSEGMMKRER ALAYAYTYQR QMQHTYDDET IGFSVNGLDR TQWGWNWLDH WMSSQPYTGR
301: QTGPGSSPGP GLYNPPPYPP FPTAAATTAG TTTPDDVSEK TVEMDVTTPT SLKERIIGLT DREYIDVGSY RPAHKQRKSP SHIPSYMIPT ASAKAKVRDQ
401: DTTVKIQGTS FMPYWNSSTK NGSINESGCD SSSSGVVSTG YPALRSPIPK MDFRKPVSPS QSPTGVGKRG WRHDL

Best Arabidopsis Sequence Match ( AT3G49260.1 )
(BLAST)

001: MGKKGSGGWF STVKKKVFKS SPKDSKRENN IGSNNADIWQ QQHDTQEVVS FEHFPAESSP EISHDVESTA STPATNVGDR KHAMAVAIAT AAAAEAAVAA
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H

Arabidopsis Description

iqd21IQ-domain 21 [Source:UniProtKB/TrEMBL;Acc:F4IWT1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.