Factsheet for Bra000930.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69140	Canola	mitochondrion, nucleus	97.14	97.14
CDX91859	Canola	mitochondrion, nucleus	94.86	93.96
AT4G00820.1	Thale cress	mitochondrion, nucleus	81.52	80.15
Bra033284.1-P	Field mustard	nucleus	67.43	67.3
Solyc10g005000.2.1	Tomato	nucleus	43.81	58.38
PGSC0003DMT400029325	Potato	mitochondrion	35.81	56.63
KRH06386	Soybean	mitochondrion, nucleus	58.29	55.64
KRH47821	Soybean	nucleus	57.52	55.31
VIT_15s0048g02680.t01	Wine grape	nucleus	57.9	54.58
GSMUA_Achr1P18950_001	Banana	nucleus	42.86	49.13
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	42.29	48.16
GSMUA_Achr1P16160_001	Banana	nucleus	39.81	46.65
TraesCSU01G104800.3	Wheat	nucleus	48.0	46.24
TraesCS7A01G317400.2	Wheat	nucleus	47.81	46.14
Os08t0115200-01	Rice	cytosol	47.62	46.04
HORVU7Hr1G075720.1	Barley	plasma membrane	47.81	45.97
TraesCS7B01G218800.3	Wheat	nucleus	47.62	45.87
GSMUA_Achr6P02050_001	Banana	cytosol	13.52	45.81
EES14418	Sorghum	cytosol	48.0	43.9
Zm00001d049684_P002	Maize	cytosol, mitochondrion	45.33	43.75
Bra000717.1-P	Field mustard	nucleus	35.81	43.52
Bra017988.1-P	Field mustard	nucleus	21.33	32.0
Bra034294.1-P	Field mustard	nucleus	21.14	27.96
Bra001855.1-P	Field mustard	cytosol	17.33	26.53
Bra031331.1-P	Field mustard	cytosol	19.05	26.04
Bra033443.1-P	Field mustard	cytosol	21.9	25.84
Bra028854.1-P	Field mustard	nucleus, plastid	21.33	25.17
Bra005462.1-P	Field mustard	cytosol, plastid	12.0	23.77
Bra009554.1-P	Field mustard	cytosol	20.76	23.14
Bra019589.1-P	Field mustard	nucleus	20.76	22.95
Bra017997.1-P	Field mustard	nucleus, plastid	20.76	22.95
Bra021588.1-P	Field mustard	cytosol, plastid	11.24	22.35
Bra007471.1-P	Field mustard	nucleus	20.76	21.98
Bra016042.1-P	Field mustard	cytosol	17.14	21.84
Bra025971.1-P	Field mustard	nucleus	15.24	21.33
Bra023846.1-P	Field mustard	cytosol	16.57	20.86
Bra021888.1-P	Field mustard	plastid	10.29	20.85
Bra034081.1-P	Field mustard	nucleus	16.95	20.05
Bra037689.1-P	Field mustard	cytosol	18.86	18.79
Bra001299.1-P	Field mustard	nucleus	15.62	17.34
Bra004776.1-P	Field mustard	nucleus	20.57	17.28
Bra000318.1-P	Field mustard	nucleus	19.43	17.14

Protein Annotations

EnsemblPlants:Bra000930.1	EnsemblPlants:Bra000930.1-P	EnsemblPlantsGene:Bra000930	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF50
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI000254068B
UniProt:M4C9Q1	MapMan:35.2	:	:	:	:

Description

AT4G00820 (E=1e-194) iqd17 | iqd17 (IQ-domain 17); calmodulin binding

Coordinates

chrA03:+:13991794..13993727

Molecular Weight (calculated)

58644.3 Da

IEP (calculated)

10.880

GRAVY (calculated)

-0.980

Length

525 amino acids

Sequence
(BLAST)

001: MGKKSGSSSS SWLTAVKRAF RSPTKKEHNN NNINAHGNEA EEDDDKKREK RRWLFRKTTN HDSSAKTTGV VKDGSAPKPV ETAAINTNAS SSVSEQRNAA
101: PPPHTTVSVV SELPPETAEL PSISSRSYSA RESYAAIIIQ TCFRGYLARR ALRALKGLVK LQALVRGHNV RKQAKMTLRC MQALVRVQSR VLDQRKRLSH
201: DGTRKSAFSD TQSVLESRFL QDISDRRSMS REGSSIAEDW EERPQTIQEV KAMLQERRDN SLSKAFSQPI RRTGGSQSIG VDEEERPKWL DRWMSSKPWD
301: KRASTDQRPP IYKTVEMDTS QPYLTRAHSR TGASPSRSQR PDTPSRTSHH YNHQQQHSFS SATPSPAKSR PIQIRSASPR IQRDDRSAYS YTSNTPSLRS
401: NYSFTARSGY SVCTTTTLPN YMAITESAKA RIRSHSAPRQ RPLTPEKDRA GSARKRLSYP VPVQPPVDYG DSNSQSLRSP SLKSIGGSQL GALEQQSNYS
501: SCYTESVGGG GEISPASTSD RRWLR

Best Arabidopsis Sequence Match ( AT4G00820.1 )
(BLAST)

001: MGKKSGSSSS WLTAVKRAFR SPTKKEHNNN AHGNEVDEDE DKKKEKRRWL FRKSTNHDSP VKTSGVGKDA PAQKSTETTT IINPTVLSSV TEQRYDASTP
101: PATVSAASET HPPSTTKELP NLTRRTYTAR EDYAAVVIQT GFRGYLARRA LRALKGLVKL QALVRGHNVR KQAKMTLRCM QALVRVQSRV LDQRKRLSHD
201: GSRKSAFSDT QSVLESRYLQ EISDRRSMSR EGSSIAEDWD DRPHTIEEVK AMLQQRRDNA LRRESNNSIS QAFSHQVRRT RGSYSTGDEY EEERPKWLDR
301: WMASKPWDKR ASTDQRVPPV YKTVEIDTSQ PYLTRGNSRT GASPSRSQRP SSPSRTSHHY QQHNFSSATP SPAKSRPIQI RSASPRIQRD DRSAYNYTSN
401: TPSLRSNYSF TARSGYSVCT TTTTATNAAL PNYMAITESA KARIRSQSAP RQRPSTPEKE RISSARKRLS FPVPPLPQQM DGQSLRSPSF KSIGGSQLGA
501: LEQQSNYSSC CTESLGGGGE ISPASTSDYR RWLR

Arabidopsis Description

iqd17IQ-domain 17 [Source:UniProtKB/TrEMBL;Acc:F4JHN2]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.