Factsheet for Bra021888.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62768	Canola	cytosol	84.17	78.7
Bra005462.1-P	Field mustard	cytosol, plastid	70.66	69.06
AT2G33990.1	Thale cress	cytosol	65.64	64.64
Bra021588.1-P	Field mustard	cytosol, plastid	43.63	42.8
Bra034294.1-P	Field mustard	nucleus	32.43	21.16
Bra031331.1-P	Field mustard	cytosol	30.12	20.31
Bra028854.1-P	Field mustard	nucleus, plastid	28.19	16.4
Bra023846.1-P	Field mustard	cytosol	25.87	16.07
Bra001855.1-P	Field mustard	cytosol	21.24	16.04
Bra034081.1-P	Field mustard	nucleus	27.03	15.77
Bra033443.1-P	Field mustard	cytosol	27.03	15.73
Bra009554.1-P	Field mustard	cytosol	28.57	15.71
Bra016042.1-P	Field mustard	cytosol	24.32	15.29
Bra025971.1-P	Field mustard	nucleus	19.69	13.6
Bra017997.1-P	Field mustard	nucleus, plastid	24.32	13.26
Bra000717.1-P	Field mustard	nucleus	22.01	13.19
Bra001299.1-P	Field mustard	nucleus	23.94	13.11
Bra019589.1-P	Field mustard	nucleus	23.17	12.63
Bra007471.1-P	Field mustard	nucleus	22.39	11.69
Bra033284.1-P	Field mustard	nucleus	22.78	11.22
Bra037689.1-P	Field mustard	cytosol	21.62	10.63
Bra017988.1-P	Field mustard	nucleus	14.29	10.57
Bra000318.1-P	Field mustard	nucleus	23.94	10.42
Bra000930.1-P	Field mustard	mitochondrion, nucleus	20.85	10.29
Bra004776.1-P	Field mustard	nucleus	22.78	9.44

Protein Annotations

EnsemblPlants:Bra021888.1	EnsemblPlants:Bra021888.1-P	EnsemblPlantsGene:Bra021888	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF9	PFscan:PS50096	UniParc:UPI00025438B0
UniProt:M4DZE1	MapMan:35.1	:	:	:	:

Description

AT2G33990 (E=2e-083) iqd9 | iqd9 (IQ-domain 9); calmodulin binding

Coordinates

chrA04:-:15051527..15053327

Molecular Weight (calculated)

29515.0 Da

IEP (calculated)

10.780

GRAVY (calculated)

-0.438

Length

259 amino acids

Sequence
(BLAST)

001: MGCGSFFKAI IGSKKGKQTS RKSEKGFIKP KASKKNVTRS ASLVFLSEDR AATRIQTTFK AYKARKMLRR LKGIARAKLL TEKQPVKKQA AVTLKYLHSW
101: SNIQSQIKAR RVGMVMEGRL IFKRLENQQK LEAKLHDIEV EWNGGTETKD EILERIHQRE EAMIKRERAL AYAFSLSSAD GKTQWLGGYE LGNTNWGWSW
201: KERWIAARPW EIDVDIGLST FPNEVTRLVI GVVTSLVVEM AFLTGKYTGR ICIAGYQCH

Best Arabidopsis Sequence Match ( AT2G33990.1 )
(BLAST)

001: MGSGNLIKAI IRLKKSKQGT EKKKTSAVKP KKGSKKKGTS LVTRSEDWAA TRIQTAFKAY KARKSLRRLK GIARAKLSTE KQSVKNQAVV TLRYLHSWSK
101: IQSEIKARRV CMVTEWRLKN KRLEHQQKLE AKLHDVEVEW NGGSETKDEI LERILQREEA TIKRERALAY AFSHQWKADG KTQWLGSYEL GNTNWGWSWK
201: ERWISARPWE VRYSVTPKKP KSSKTDSNSP AKRTVSLSSV PAKTPFPGAR NTVKPRRLSF PGA

Arabidopsis Description

iqd9IQ-domain 9 [Source:UniProtKB/TrEMBL;Acc:Q0WNP8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.