Factsheet for Bra023846.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39505	Canola	cytosol	85.85	90.63
Bra001855.1-P	Field mustard	cytosol	59.23	72.01
Bra031331.1-P	Field mustard	cytosol	64.51	70.05
VIT_06s0009g00210.t01	Wine grape	cytosol	50.6	47.42
KRH22612	Soybean	cytosol	44.36	43.53
Solyc11g071840.1.1	Tomato	cytosol	46.28	43.08
KRH26707	Soybean	cytosol	43.41	42.89
GSMUA_Achr4P31410_001	Banana	cytosol	44.84	42.5
KRH39086	Soybean	cytosol	43.41	41.71
Os03t0787200-01	Rice	cytosol	41.01	40.52
GSMUA_Achr5P02600_001	Banana	cytosol	42.21	40.09
GSMUA_Achr4P22800_001	Banana	cytosol	41.49	39.86
EER90769	Sorghum	mitochondrion	41.49	39.32
TraesCS5B01G427800.1	Wheat	cytosol, mitochondrion	40.05	38.84
Zm00001d034366_P003	Maize	mitochondrion	41.49	38.7
TraesCS5A01G425800.1	Wheat	cytosol, mitochondrion	39.33	38.14
Os12t0619000-01	Rice	cytosol	39.57	37.33
HORVU5Hr1G007780.1	Barley	cytosol	37.89	36.83
TraesCS5D01G037300.2	Wheat	nucleus	37.89	36.74
KXG24027	Sorghum	cytosol	38.61	36.59
TraesCSU01G076200.1	Wheat	cytosol, mitochondrion	37.41	36.28
TraesCS5A01G029600.3	Wheat	nucleus	37.65	36.18
Os03t0648300-01	Rice	cytosol	37.65	35.68
TraesCS5B01G028200.1	Wheat	nucleus	37.65	35.44
EER91163	Sorghum	cytosol	35.25	34.83
Zm00001d033211_P002	Maize	cytosol	35.25	34.27
HORVU5Hr1G092660.2	Barley	nucleus	35.01	33.33
TraesCS5B01G375000.1	Wheat	nucleus	34.77	33.26
TraesCS5A01G373000.1	Wheat	nucleus	34.53	33.03
TraesCS5D01G382500.1	Wheat	nucleus	34.53	32.88
Zm00001d013112_P011	Maize	mitochondrion	39.57	32.74
Zm00001d031098_P004	Maize	cytosol	39.57	32.67
Bra005462.1-P	Field mustard	cytosol, plastid	18.47	29.06
Bra034294.1-P	Field mustard	nucleus	27.34	28.72
Bra025971.1-P	Field mustard	nucleus	23.5	26.13
Bra021888.1-P	Field mustard	plastid	16.07	25.87
Bra016042.1-P	Field mustard	cytosol	25.18	25.49
Bra021588.1-P	Field mustard	cytosol, plastid	16.07	25.38
Bra028854.1-P	Field mustard	nucleus, plastid	22.54	21.12
Bra017988.1-P	Field mustard	nucleus	17.03	20.29
Bra033443.1-P	Field mustard	cytosol	21.1	19.78
Bra000717.1-P	Field mustard	nucleus	20.38	19.68
Bra009554.1-P	Field mustard	cytosol	20.62	18.26
Bra033284.1-P	Field mustard	nucleus	23.02	18.25
Bra017997.1-P	Field mustard	nucleus, plastid	20.62	18.11
Bra019589.1-P	Field mustard	nucleus	19.9	17.47
Bra000930.1-P	Field mustard	mitochondrion, nucleus	20.86	16.57
Bra034081.1-P	Field mustard	nucleus	17.27	16.22
Bra007471.1-P	Field mustard	nucleus	18.7	15.73
Bra001299.1-P	Field mustard	nucleus	16.55	14.59
Bra037689.1-P	Field mustard	cytosol	17.03	13.47
Bra004776.1-P	Field mustard	nucleus	18.23	12.16
Bra000318.1-P	Field mustard	nucleus	16.79	11.76

Protein Annotations

EnsemblPlants:Bra023846.1	EnsemblPlants:Bra023846.1-P	EnsemblPlantsGene:Bra023846	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF12	PFAM:PF00612
PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI0002544362	UniProt:M4E4Z2	MapMan:35.2

Description

AT3G22190 (E=6e-105) IQD5 | IQD5 (IQ-domain 5); calmodulin binding

Coordinates

chrA01:+:20382639..20388121

Molecular Weight (calculated)

46330.9 Da

IEP (calculated)

10.766

GRAVY (calculated)

-0.721

Length

417 amino acids

Sequence
(BLAST)

001: MTERSTDNEK NRSESLSFVL ILKKLINLGK VDVKDVVAEI GANPDALNAK LMAKVATKSR FRKKHSVDLD AEKLQDSYAH SVIDTGVSTS TSLQSYCGAP
101: YEEQSKEHYA ATRIQTAFRA FLARRALRAL KGLVRLQALV RGHSVRKQAA VTLRCMQALV RVQARVRARR VRLALESETR QQLQQQLADE ARVREIEEGW
201: CDSIGSVEQI QEKLIKRQEA AAKRERAMAY ALTHQWQAET RQLSAHNGFQ PEEKNWGRNR FLDSYLVEDA KLGENNIEQA ENVHKTQMKS ASKMQNTSNL
301: VSGVSSQKAT WPPSLSDGDS SSPVISSSMP VVSKARSKPT KDDLAVEVNS RPVAGLRSRK PDRSSRGRLS LPNSGKSLGS QSAKAKRAGT LTPTSQKVAV
401: EDNSAQNQRR RNSEPTK

Best Arabidopsis Sequence Match ( AT3G22190.1 )
(BLAST)

001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA

Arabidopsis Description

IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.