Factsheet for TraesCS5A01G029600.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 2
plastid 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G037300.2	Wheat	nucleus	94.24	95.12
HORVU5Hr1G007780.1	Barley	cytosol	90.78	91.84
TraesCS5B01G028200.1	Wheat	nucleus	92.86	90.97
Os12t0619000-01	Rice	cytosol	70.51	69.23
KXG24027	Sorghum	cytosol	65.21	64.32
Zm00001d031098_P004	Maize	cytosol	63.82	54.85
TraesCS5A01G373000.1	Wheat	nucleus	54.84	54.59
CDY37387	Canola	cytosol	40.78	46.09
Bra031331.1-P	Field mustard	cytosol	40.78	46.09
CDY24286	Canola	cytosol	42.86	46.04
CDX92933	Canola	cytosol, plastid	42.4	45.89
GSMUA_Achr4P31410_001	Banana	cytosol	46.08	45.45
GSMUA_Achr4P22800_001	Banana	cytosol	44.7	44.7
GSMUA_Achr5P02600_001	Banana	cytosol	45.16	44.65
CDY10618	Canola	cytosol	41.47	44.34
VIT_06s0009g00210.t01	Wine grape	cytosol	45.39	44.27
KRH26707	Soybean	cytosol	42.4	43.6
AT3G22190.2	Thale cress	cytosol	42.4	43.6
KRH22612	Soybean	cytosol	42.63	43.53
Bra001855.1-P	Field mustard	cytosol	32.95	41.69
Solyc11g071840.1.1	Tomato	cytosol	42.86	41.52
KRH39086	Soybean	cytosol	41.24	41.24
TraesCS5A01G425800.1	Wheat	cytosol, mitochondrion	40.55	40.93
CDY39505	Canola	cytosol	37.1	40.76
CDX92931	Canola	mitochondrion, nucleus	23.04	39.22
CDY58749	Canola	cytosol	40.55	38.6
Bra023846.1-P	Field mustard	cytosol	36.18	37.65
CDY24282	Canola	mitochondrion	23.27	33.11
TraesCS3A01G105600.1	Wheat	cytosol, nucleus, peroxisome	29.03	28.77
TraesCS7A01G112000.1	Wheat	nucleus	20.28	26.91
TraesCS3A01G251400.1	Wheat	cytosol	25.35	25.52
TraesCS1A01G362400.1	Wheat	mitochondrion	22.81	24.21
TraesCS1A01G064100.1	Wheat	cytosol	24.65	22.29
TraesCS3A01G352500.1	Wheat	cytosol	25.58	22.24
TraesCS3A01G538100.1	Wheat	cytosol, mitochondrion	25.58	20.9
TraesCS7A01G317400.2	Wheat	nucleus	23.73	18.93
TraesCS1A01G288100.2	Wheat	nucleus	19.59	16.31
TraesCS3A01G398900.1	Wheat	cytosol	20.05	13.96

Protein Annotations

EnsemblPlants:TraesCS5A01G029600.3	EnsemblPlantsGene:TraesCS5A01G029600	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF23	PFAM:PF00612	PFscan:PS50096
SEG:seg	SMART:SM00015	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr5A:+:25699795..25704275

Molecular Weight (calculated)

46545.5 Da

IEP (calculated)

11.013

GRAVY (calculated)

-0.961

Length

434 amino acids

Sequence
(BLAST)

001: MGISSKWIKS LVGIKKHGKA QNGESSREVS QRRSSAAQLL HKRKHSVDTE GSLAVAEHTV QIEPLASDTN TQTISSETEL NTKEHQAATV IQSAFRAFLA
101: RRALRALKGL VRLQALVRGH AVRKQAAETL QCMQSLVKAQ ARVRARQVRI GLEGQVPQKK APEQNAQEDQ AREIEERWCG GIGSAEDMQA KALKKQEAAA
201: KRERAMAYAL THQRQAGSRK QKAADVQGPE ADENQWGRNW VERWVAVRPW ENRLLDSNAK ENVPIGDDKE AEENGDRDVN KPKGKVAVSG IQSNGSSGTK
301: DAKHKKSHSD ASGSSSGQSA AAPPAASLGS SKLKPKPSGQ TSEEVSPQPT DPATRSTSNP KERPAAQVNA PTKKRLSLPS NGTAGGGARK GQANSSEKAR
401: PVGSKNKAKG ASKSEPKQRR SPGSATAKRA QAQA

Best Arabidopsis Sequence Match ( AT2G26180.1 )
(BLAST)

001: MGASGKWVKS IIGLKKLEKD EIEKGNGKNK KWKLWRTTSV DSWKGFRGKH RSDSDGVDSS TVYSAAVATV LRAPPKDFKA VREEWAAIRI QTAFRGFLAR
101: RALRALKGIV RLQALVRGRQ VRKQAAVTLR CMQALVRVQA RVRARRVRMT VEGQAVQKLL DEHRTKSDLL KEVEEGWCDR KGTVDDIKSK LQQRQEGAFK
201: RERALAYALA QKQWRSTTSS NLKTNSSISY LKSQEFDKNS WGWSWLERWM AARPWETRLM DTVDTAATPP PLPHKHLKSP ETADVVQVRR NNVTTRVSAK
301: PPPHMLSSSP GYEFNESSGS SSICTSTTPV SGKTGLVSDN SSSQAKKHKP SYMSLTESTK AKRRTNRGLR QSMDEFQFMK NSGMFTGELK TSPSSDPFVS
401: FSKPLGVPTR FEKPRG

Arabidopsis Description

IQD6At2g26180 [Source:UniProtKB/TrEMBL;Acc:O64852]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.