Factsheet for TraesCS3A01G251400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G280900.1	Wheat	cytosol	98.14	98.37
TraesCS3D01G251800.2	Wheat	cytosol	98.38	95.71
HORVU3Hr1G066840.2	Barley	cytosol	87.94	88.97
EES03502	Sorghum	mitochondrion	77.73	76.66
Os01t0708700-01	Rice	cytosol	76.57	74.83
Zm00001d043691_P001	Maize	mitochondrion	74.01	72.67
TraesCS1A01G362400.1	Wheat	mitochondrion	54.06	56.97
CDX72935	Canola	cytosol	25.99	42.59
TraesCS3A01G105600.1	Wheat	cytosol, nucleus, peroxisome	42.23	41.55
Solyc03g121760.2.1	Tomato	cytosol	40.6	40.79
PGSC0003DMT400006376	Potato	cytosol	40.14	40.52
Bra025971.1-P	Field mustard	nucleus	33.64	38.67
CDY26241	Canola	nucleus	33.64	38.67
AT1G72670.1	Thale cress	cytosol	36.66	38.16
CDY48305	Canola	nucleus	33.18	38.13
AT1G17480.1	Thale cress	cytosol	32.71	38.01
Bra016042.1-P	Field mustard	cytosol	35.96	37.62
KRH10035	Soybean	cytosol	36.19	37.5
KRH23285	Soybean	nucleus	35.5	37.14
KRH44124	Soybean	mitochondrion	35.03	35.87
KRH47099	Soybean	cytosol	36.43	34.06
TraesCS5A01G425800.1	Wheat	cytosol, mitochondrion	26.22	26.28
TraesCS5A01G029600.3	Wheat	nucleus	25.52	25.35
TraesCS7A01G112000.1	Wheat	nucleus	18.79	24.77
TraesCS5A01G373000.1	Wheat	nucleus	23.67	23.39
TraesCS1A01G064100.1	Wheat	cytosol	25.75	23.12
TraesCS3A01G352500.1	Wheat	cytosol	26.45	22.85
TraesCS7A01G317400.2	Wheat	nucleus	26.68	21.14
TraesCS3A01G538100.1	Wheat	cytosol, mitochondrion	23.9	19.4
TraesCS1A01G288100.2	Wheat	nucleus	21.35	17.66
TraesCS3A01G398900.1	Wheat	cytosol	21.35	14.77

Protein Annotations

EnsemblPlants:TraesCS3A01G251400.1	EnsemblPlantsGene:TraesCS3A01G251400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF34	PFAM:PF00612	PFscan:PS50096	SEG:seg
SMART:SM00015	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:471278371..471280808

Molecular Weight (calculated)

47077.1 Da

IEP (calculated)

11.339

GRAVY (calculated)

-0.741

Length

431 amino acids

Sequence
(BLAST)

001: MGASGKWIKT LVGLKTAAAE KERHAGGKGR KWSRLWRSSS GGQRGAASAA ASEVSETSSA AADALSSVVA AVVRAPPRDF RVIRQEWAAV RIQTAFRGFL
101: ARRALRALRG IVRLQALVRG RRVRKQLAVT VKCMQALVRV QARARDRRTR LSADGRDSQD TLDDHSSHAD PVKEAETGWC DSQGTVDDVR SKIHMRREGA
201: IKRERAIAYA LSHQRNPNHN GRPSSPAVSL KNHGTNRSNQ WSYLDGWMTT KPWESRLMEQ SHSEQTNSRC SESIDEMNEV SSKLSEASSV KIRRNNVTTR
301: VSAKPPSVIA VCDESAPSTS SVTQMTGNHF ATSERRSDCG QGGAPSYMGL TKSAKARLSG SSSTHKPPLQ RQGSADTHNY SRGAFSSIDV QSTAGSEVSV
401: TSKRLNGLTL KGRGTRRSMD KENDDQSNSF F

Best Arabidopsis Sequence Match ( AT1G72670.1 )
(BLAST)

001: MGGSGNWIKS LITNKKNITD DQEKNIKKKW KLWRTSSEGL ISSSKGFKSR GGSYGTPSLG SDPPSFSADD SFTAAVAAVI RAPPKDFFLV KREWAATRIQ
101: AAFRAFLARQ ALRALKAVVR IQAIFRGRQV RKQADVTLRC MQALVRVQAR VRAHCNRGPS DGQELEKPSD QQKDDPAKQA EKGWCDSPGS INEVRTKLQM
201: RQEGAIKRER AMVYALTHQP RTCPSPAKAS KQGSVKKNNG SCKSSPGWNW LDRWVADRPW EGRLMEGPTN SSENARKSES SVSEHDTVQV RKNNLTTRVL
301: ARPPPMSSSA TSSESSSTSQ SPVPFSGSFL EEGGYYRKPS YMSLTQSIKA KQRRSGSSSS CSKTPFEKKQ SMSYNGDVNV RRSAGSDPLN NQWTDLYPPA
401: QVTGRHMWAK SQRG

Arabidopsis Description

iqd8At1g72670 [Source:UniProtKB/TrEMBL;Acc:Q9CAI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.