Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025971.1-P | Field mustard | nucleus | 97.87 | 97.87 |
| CDY26241 | Canola | nucleus | 97.6 | 97.6 |
| AT1G17480.1 | Thale cress | cytosol | 81.87 | 82.75 |
| CDX96427 | Canola | cytosol | 45.6 | 70.37 |
| CDX72935 | Canola | cytosol | 46.67 | 66.54 |
| CDX96426 | Canola | nucleus, plastid | 16.8 | 61.76 |
| CDX72934 | Canola | nucleus, plastid | 16.8 | 61.76 |
| KRH10035 | Soybean | cytosol | 44.0 | 39.66 |
| KRH23285 | Soybean | nucleus | 42.4 | 38.59 |
| KRH44124 | Soybean | mitochondrion | 43.2 | 38.48 |
| PGSC0003DMT400006376 | Potato | cytosol | 43.73 | 38.41 |
| Solyc03g121760.2.1 | Tomato | cytosol | 43.47 | 38.0 |
| CDX77034 | Canola | cytosol | 39.73 | 37.63 |
| CDY35313 | Canola | nucleus | 39.2 | 37.03 |
| KRH47099 | Soybean | cytosol | 44.27 | 36.01 |
| TraesCS3B01G280900.1 | Wheat | cytosol | 38.13 | 33.26 |
| TraesCS3A01G251400.1 | Wheat | cytosol | 38.13 | 33.18 |
| Os01t0708700-01 | Rice | cytosol | 38.4 | 32.65 |
| Os05t0541100-01 | Rice | plastid | 35.47 | 32.6 |
| TraesCS3D01G251800.2 | Wheat | cytosol | 38.4 | 32.51 |
| EES03502 | Sorghum | mitochondrion | 37.33 | 32.04 |
| Zm00001d043691_P001 | Maize | mitochondrion | 37.07 | 31.66 |
| Zm00001d038861_P001 | Maize | cytosol, plastid | 35.73 | 31.24 |
| HORVU3Hr1G066840.2 | Barley | cytosol | 34.13 | 30.05 |
| TraesCS1B01G379600.1 | Wheat | mitochondrion | 32.53 | 29.33 |
| TraesCS1A01G362400.1 | Wheat | mitochondrion | 31.2 | 28.61 |
| CDY37387 | Canola | cytosol | 27.73 | 27.08 |
| TraesCS1D01G367300.2 | Wheat | mitochondrion, plastid | 31.73 | 26.39 |
| CDY24286 | Canola | cytosol | 28.27 | 26.24 |
| CDY10618 | Canola | cytosol | 28.27 | 26.11 |
| CDY39505 | Canola | cytosol | 27.2 | 25.82 |
| KXG22437 | Sorghum | mitochondrion, plastid | 37.33 | 25.64 |
| CDX92933 | Canola | cytosol, plastid | 27.2 | 25.44 |
| HORVU1Hr1G079590.12 | Barley | cytosol | 30.93 | 24.79 |
| CDY17214 | Canola | cytosol, plastid | 16.8 | 23.77 |
| CDY27925 | Canola | plastid | 16.8 | 23.77 |
| CDY58749 | Canola | cytosol | 27.47 | 22.59 |
| CDY32322 | Canola | cytosol, plastid | 15.47 | 22.39 |
| CDY20099 | Canola | cytosol | 15.73 | 22.35 |
| CDY55696 | Canola | nucleus, plastid | 23.73 | 20.37 |
| CDY04876 | Canola | nucleus, plastid | 24.0 | 20.22 |
| CDX80849 | Canola | cytosol, plastid | 22.93 | 20.19 |
| CDY11238 | Canola | cytosol, plastid | 22.13 | 20.1 |
| CDY08120 | Canola | mitochondrion, nucleus | 25.33 | 20.04 |
| CDY62768 | Canola | cytosol | 14.67 | 19.86 |
| CDY05917 | Canola | mitochondrion, nucleus | 25.07 | 19.79 |
| CDY05931 | Canola | nucleus | 17.87 | 19.03 |
| CDY08131 | Canola | nucleus | 17.33 | 18.9 |
| CDX92931 | Canola | mitochondrion, nucleus | 12.8 | 18.82 |
| CDX86983 | Canola | nucleus | 23.73 | 18.74 |
| CDY10410 | Canola | cytosol, plastid | 22.13 | 18.69 |
| CDX90766 | Canola | nucleus | 21.33 | 18.56 |
| CDY05111 | Canola | nucleus | 21.07 | 18.41 |
| CDY00196 | Canola | nucleus | 23.2 | 18.32 |
| CDY23202 | Canola | cytosol | 21.33 | 17.98 |
| CDX95328 | Canola | cytosol | 21.07 | 17.75 |
| CDX70333 | Canola | cytosol | 22.13 | 17.29 |
| CDY05918 | Canola | mitochondrion | 14.4 | 17.2 |
| CDY30433 | Canola | cytosol | 20.27 | 16.89 |
| CDX71881 | Canola | nucleus | 21.07 | 15.99 |
| CDY05984 | Canola | nucleus | 21.07 | 15.96 |
| CDY15200 | Canola | nucleus | 21.6 | 15.85 |
| CDX90011 | Canola | nucleus | 21.33 | 15.75 |
| CDY23391 | Canola | cytosol | 19.2 | 15.62 |
| CDY38525 | Canola | cytosol | 17.07 | 15.5 |
| CDY69140 | Canola | mitochondrion, nucleus | 21.6 | 15.43 |
| CDX91859 | Canola | mitochondrion, nucleus | 21.6 | 15.28 |
| CDY24282 | Canola | mitochondrion | 11.73 | 14.43 |
| CDY07937 | Canola | nucleus | 16.8 | 13.18 |
| CDX83468 | Canola | plasma membrane | 19.2 | 13.07 |
| CDY44247 | Canola | nucleus | 19.2 | 12.95 |
| CDY66694 | Canola | nucleus | 20.53 | 12.85 |
| CDX83237 | Canola | cytosol | 17.33 | 12.82 |
| CDX79809 | Canola | nucleus | 20.27 | 12.71 |
| CDX73992 | Canola | nucleus | 16.0 | 12.58 |
| CDY22198 | Canola | cytosol | 18.4 | 12.34 |
| CDY41307 | Canola | cytosol | 17.87 | 12.25 |
Protein Annotations
| EnsemblPlants:CDY48305 | EnsemblPlantsGene:GSBRNA2T00089268001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | InterPro:P-loop_NTPase | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF25 | PFAM:PF00612 |
| PFscan:PS50096 | ProteinID:CDY48305 | ProteinID:CDY48305.1 | SEG:seg | SMART:SM00015 | SUPFAM:SSF52540 |
| UniParc:UPI0004EC6AFB | UniProt:A0A078IBP2 | MapMan:35.2 | : | : | : |
Description
BnaC05g13590DBnaC05g13590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBP2]
Coordinates
chrLK032765:-:53868..55536
Molecular Weight (calculated)
41587.2 Da
IEP (calculated)
11.283
GRAVY (calculated)
-0.698
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSGNWIKS LLSHRKHVDD HQQEKLSSKK KWKLWRLSSE SFTSSSSSSK ECFLNRRGSY GLSSLGSEPP SFSADEAFAV AMAALIRAPP KDFLLVKREW
101: ASTRIQAAFR AFLARQAFRA LKAVVRIQAI FRGRQVRKQA AVTLRCMQAL VRVQSRVRAH RRAPSDSTEL KDSSKQSERS WCGSPRSIKE VKTKLQMKQE
201: GAIKRERAMV YALTHQSRAF PSPNARSIKN HGLRKSGPGW NWSEKCSDSS VSSEHETVKV RKNNLTSTRV LARPPHLLLP QVLSGTSSDS LHDETSTSST
301: SQSPVAFSGR GLEGGGYYRK PSYMSLTQST QAKQRGSGSS SNGDARSSVG SDQCTDLYPP EIVTGRHLWA KSQRS
101: ASTRIQAAFR AFLARQAFRA LKAVVRIQAI FRGRQVRKQA AVTLRCMQAL VRVQSRVRAH RRAPSDSTEL KDSSKQSERS WCGSPRSIKE VKTKLQMKQE
201: GAIKRERAMV YALTHQSRAF PSPNARSIKN HGLRKSGPGW NWSEKCSDSS VSSEHETVKV RKNNLTSTRV LARPPHLLLP QVLSGTSSDS LHDETSTSST
301: SQSPVAFSGR GLEGGGYYRK PSYMSLTQST QAKQRGSGSS SNGDARSSVG SDQCTDLYPP EIVTGRHLWA KSQRS
001: MGGSGNWIRS LISNRKPVND QQEKLSDKSS KKKWKLWRIS SESLASSSFK SRGSYAASSL GSELPSFSAD EAFTTAMAAL IRAPPRDFLM VKREWASTRI
101: QAAFRAFLAR QAFRALKAVV RIQAIFRGRQ VRKQAAVTLR CMQALVRVQS RVRAHRRAPS DSLELKDPVK QTEKGWCGSP RSIKEVKTKL QMKQEGAIKR
201: ERAMVYALTH QSRTCPSPSG RAITHHGLRK SSPGWNWYDD VGTFSRKSSE SSVLSEYETV TVRKNNLSST RVLARPPLLL PPVSSGMSYD SLHDETSTSS
301: TSQSPVAFSS SVLDGGGYYR KPSYMSLTQS TQAKQRQSGL SCNGDARRSA GSDQCTDLYP PGNVWAKSQR S
101: QAAFRAFLAR QAFRALKAVV RIQAIFRGRQ VRKQAAVTLR CMQALVRVQS RVRAHRRAPS DSLELKDPVK QTEKGWCGSP RSIKEVKTKL QMKQEGAIKR
201: ERAMVYALTH QSRTCPSPSG RAITHHGLRK SSPGWNWYDD VGTFSRKSSE SSVLSEYETV TVRKNNLSST RVLARPPLLL PPVSSGMSYD SLHDETSTSS
301: TSQSPVAFSS SVLDGGGYYR KPSYMSLTQS TQAKQRQSGL SCNGDARRSA GSDQCTDLYP PGNVWAKSQR S
Arabidopsis Description
IQD7At1g17480 [Source:UniProtKB/TrEMBL;Acc:Q2NND9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.