Factsheet for HORVU1Hr1G079590.12

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G362400.1	Wheat	mitochondrion	78.85	90.22
TraesCS1B01G379600.1	Wheat	mitochondrion	79.49	89.42
TraesCS1D01G367300.2	Wheat	mitochondrion, plastid	78.42	81.37
Os05t0541100-01	Rice	plastid	54.06	62.01
Zm00001d038861_P001	Maize	cytosol, plastid	52.35	57.11
KXG22437	Sorghum	mitochondrion, plastid	60.04	51.47
HORVU3Hr1G066840.2	Barley	cytosol	45.94	50.47
CDX72935	Canola	cytosol	18.8	33.46
PGSC0003DMT400006376	Potato	cytosol	30.34	33.26
AT1G17480.1	Thale cress	cytosol	26.28	33.15
Solyc03g121760.2.1	Tomato	cytosol	30.34	33.1
HORVU3Hr1G019240.2	Barley	mitochondrion, peroxisome	33.55	31.72
KRH10035	Soybean	cytosol	27.99	31.49
CDY26241	Canola	nucleus	25.21	31.47
Bra025971.1-P	Field mustard	nucleus	25.21	31.47
CDY48305	Canola	nucleus	24.79	30.93
KRH23285	Soybean	nucleus	26.71	30.34
AT1G72670.1	Thale cress	cytosol	26.71	30.19
Bra016042.1-P	Field mustard	cytosol	26.28	29.85
KRH44124	Soybean	mitochondrion	26.07	28.98
KRH47099	Soybean	cytosol	27.35	27.77
HORVU5Hr1G007780.1	Barley	cytosol	22.22	24.24
HORVU7Hr1G024060.1	Barley	plastid	8.33	22.16
HORVU5Hr1G092660.2	Barley	nucleus	20.51	21.92
HORVU3Hr1G087500.2	Barley	cytosol	22.22	20.84
HORVU1Hr1G013210.1	Barley	cytosol	21.37	20.66
HORVU7Hr1G023980.1	Barley	nucleus	14.1	20.18
HORVU7Hr1G075720.1	Barley	plasma membrane	22.44	19.23
HORVU1Hr1G071700.1	Barley	nucleus	19.02	17.32
HORVU3Hr1G117830.2	Barley	endoplasmic reticulum, extracellular	20.94	16.78
HORVU3Hr1G089690.1	Barley	cytosol	17.73	13.22

Protein Annotations

EnsemblPlants:HORVU1Hr1G079590.12	EnsemblPlantsGene:HORVU1Hr1G079590	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295	PANTHER:PTHR32295:SF34	PFAM:PF00612	PFscan:PS50096
SEG:seg	SUPFAM:SSF52540	UniParc:UPI000B470C7B	UniProt:A0A287GES9	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr1H:-:523375468..523378228

Molecular Weight (calculated)

51659.0 Da

IEP (calculated)

11.508

GRAVY (calculated)

-0.740

Length

468 amino acids

Sequence
(BLAST)

001: ETDGRKLPPE ERKRQRLPPP PPPLPFCLVH IGVLLLHRSS PLSSSVLTHA RSATRTSMGK WIRSLVGLKA PSSSAAPGKG PRKWSRLWRG ASRDAAGGSE
101: TSSTTSSTVV AAVARAPPAD FRVIRQEWAA VRIQAAFRAL LARRALKALR GIVRLQALVR GRLVRRQLAV TLSRMEALLR VQERAMERRA RCSADAHSQS
201: QDAPTDRNGR AHPLRETEEQ WCDRQGSVNQ VKSRMHMKHE GAVKRQRAIA YAHSHQRQSS RYSGRPSSPA RSLRNHESYI EGWMATKPWE STHVDSNLGE
301: SRRLQSYKEK MNFEDSKYSC AGSIKIRRNN ESTRVEAMPQ LALSASSSDF GCDESSPSTS SMTPGYSANT LGSEARSGSG GGPGYMSLTK AAKARLEDAS
401: DSRRGPFQLQ RQRSGGVPYY NRRVALSSLD SESNAGSDVS VAARRLNSLS LKGQSMTRSL DKENESWF

Best Arabidopsis Sequence Match ( AT1G17480.1 )
(BLAST)

001: MGGSGNWIRS LISNRKPVND QQEKLSDKSS KKKWKLWRIS SESLASSSFK SRGSYAASSL GSELPSFSAD EAFTTAMAAL IRAPPRDFLM VKREWASTRI
101: QAAFRAFLAR QAFRALKAVV RIQAIFRGRQ VRKQAAVTLR CMQALVRVQS RVRAHRRAPS DSLELKDPVK QTEKGWCGSP RSIKEVKTKL QMKQEGAIKR
201: ERAMVYALTH QSRTCPSPSG RAITHHGLRK SSPGWNWYDD VGTFSRKSSE SSVLSEYETV TVRKNNLSST RVLARPPLLL PPVSSGMSYD SLHDETSTSS
301: TSQSPVAFSS SVLDGGGYYR KPSYMSLTQS TQAKQRQSGL SCNGDARRSA GSDQCTDLYP PGNVWAKSQR S

Arabidopsis Description

IQD7At1g17480 [Source:UniProtKB/TrEMBL;Acc:Q2NND9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.