CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44124	Soybean	mitochondrion	83.73	91.69
KRH10035	Soybean	cytosol	57.7	63.94
KRH23285	Soybean	nucleus	56.18	62.86
CDX72935	Canola	cytosol	27.98	49.05
Bra025971.1-P	Field mustard	nucleus	36.23	44.53
CDY26241	Canola	nucleus	36.23	44.53
PGSC0003DMT400006376	Potato	cytosol	41.21	44.5
AT1G17480.1	Thale cress	cytosol	35.79	44.47
Solyc03g121760.2.1	Tomato	cytosol	41.21	44.29
CDY48305	Canola	nucleus	36.01	44.27
Bra016042.1-P	Field mustard	cytosol	39.05	43.69
KRH15576	Soybean	cytosol	39.48	43.65
KRH05433	Soybean	cytosol	39.05	43.58
KRH61522	Soybean	cytosol	42.08	43.11
AT1G72670.1	Thale cress	cytosol	38.61	43.0
KRH52206	Soybean	cytosol	41.87	42.89
TraesCS3B01G280900.1	Wheat	cytosol	34.27	36.74
TraesCS3A01G251400.1	Wheat	cytosol	34.06	36.43
TraesCS3D01G251800.2	Wheat	cytosol	34.92	36.34
Os01t0708700-01	Rice	cytosol	33.41	34.92
EES03502	Sorghum	mitochondrion	32.97	34.78
Os05t0541100-01	Rice	plastid	30.37	34.31
Zm00001d038861_P001	Maize	cytosol, plastid	31.89	34.27
Zm00001d043691_P001	Maize	mitochondrion	32.1	33.71
HORVU3Hr1G066840.2	Barley	cytosol	30.37	32.86
TraesCS1B01G379600.1	Wheat	mitochondrion	28.63	31.73
TraesCS1A01G362400.1	Wheat	mitochondrion	27.11	30.56
KRH22612	Soybean	cytosol	27.33	29.65
KRH39086	Soybean	cytosol	27.33	29.03
KRH26707	Soybean	cytosol	26.46	28.91
TraesCS1D01G367300.2	Wheat	mitochondrion, plastid	28.2	28.82
HORVU1Hr1G079590.12	Barley	cytosol	27.77	27.35
KXG22437	Sorghum	mitochondrion, plastid	31.24	26.37
KRH50151	Soybean	cytosol	16.49	26.21
KRH32840	Soybean	mitochondrion, nucleus	7.38	25.76
KRH21320	Soybean	cytosol	16.27	25.08
KRH20344	Soybean	cytosol	15.84	24.58
KRH10977	Soybean	cytosol	16.05	24.03
KRH53505	Soybean	cytosol	22.78	23.54
KRH64435	Soybean	nucleus	22.78	22.68
KRH16503	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	22.13	22.27
KRH55128	Soybean	mitochondrion, nucleus	13.88	21.62
KRG95941	Soybean	nucleus	22.34	21.59
KRH67648	Soybean	nucleus	22.13	21.38
KRH27315	Soybean	cytosol	13.45	21.09
KRH19825	Soybean	cytosol	21.26	20.85
KRH32420	Soybean	cytosol	20.61	20.04
KRH47821	Soybean	nucleus	23.64	19.96
KRH57858	Soybean	cytosol	19.52	19.82
KRH06386	Soybean	mitochondrion, nucleus	23.43	19.64
KRH04761	Soybean	cytosol	20.17	19.25
KRH37691	Soybean	mitochondrion	7.16	18.23
KRH34906	Soybean	cytosol	19.09	18.22
KRH22000	Soybean	plastid	13.45	18.08
KRG91856	Soybean	cytosol	18.87	17.79
KRH71267	Soybean	cytosol	16.92	14.58
KRH50198	Soybean	cytosol	16.7	14.45

Protein Annotations

EMBL:ACUP02004135	EnsemblPlants:KRH47099	EnsemblPlantsGene:GLYMA_07G008400	EntrezGene:100784093	Gene3D:1.20.5.190	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF86
PFAM:PF00612	PFscan:PS50096	ProteinID:KRH47099	ProteinID:KRH47099.1	SEG:seg	SMART:SM00015
UniParc:UPI0003DEC9A5	UniProt:A0A0R0J5D5	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:612534..615510

Molecular Weight (calculated)

51088.0 Da

IEP (calculated)

10.585

GRAVY (calculated)

-0.559

Length

461 amino acids

Sequence
(BLAST)

001: MGGSGRWLKS LISLRKPSTI DQEKGGDKSK RKWKLWKSTS EGFGIGSSMQ KGHGGGGSFV VDDGAFAAAL AAVVRTPLKD FMVIKQEWAA IRIQAVFRGF
101: LMGVDYRRIC HSFGRSFCCV GGFLLVYLKA RRALRALKAV VRLQAIFRGW QVRKQAAVTL RCMQALVRVQ ARVKARNVGN SQEGKSAGEH CNEADPVKQA
201: EQGWCDIPGT VEEVKEKLQM RQEGAIKRDR TKAYSQSKKK STERASPNSR AAKSVIPLKN RNLDSKSSGW NMLDLWMAAK PWESRSMVEM YLDSPDMTPV
301: TSKSDHLVLP FNSDQQNGSV KSRSNGVTTR ISTNSLTTSQ STPSSSAISS ECMHDDSPMS TSCTSGSPSR PSNNNVTVEA TEERNACKPS YMNLTASTKA
401: KLKPYRCFSQ NAKRIFMDDC VSLSGVTRSS SGFYPSANTW KNLYATPLRT SYQKRYTMEY K

Best Arabidopsis Sequence Match ( AT1G17480.1 )
(BLAST)

001: MGGSGNWIRS LISNRKPVND QQEKLSDKSS KKKWKLWRIS SESLASSSFK SRGSYAASSL GSELPSFSAD EAFTTAMAAL IRAPPRDFLM VKREWASTRI
101: QAAFRAFLAR QAFRALKAVV RIQAIFRGRQ VRKQAAVTLR CMQALVRVQS RVRAHRRAPS DSLELKDPVK QTEKGWCGSP RSIKEVKTKL QMKQEGAIKR
201: ERAMVYALTH QSRTCPSPSG RAITHHGLRK SSPGWNWYDD VGTFSRKSSE SSVLSEYETV TVRKNNLSST RVLARPPLLL PPVSSGMSYD SLHDETSTSS
301: TSQSPVAFSS SVLDGGGYYR KPSYMSLTQS TQAKQRQSGL SCNGDARRSA GSDQCTDLYP PGNVWAKSQR S

Arabidopsis Description

IQD7At1g17480 [Source:UniProtKB/TrEMBL;Acc:Q2NND9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.