Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400006376 | Potato | cytosol | 95.57 | 96.02 |
| CDX72935 | Canola | cytosol | 32.4 | 52.85 |
| Solyc08g062940.2.1 | Tomato | cytosol | 34.97 | 48.54 |
| AT1G72670.1 | Thale cress | cytosol | 45.22 | 46.86 |
| Bra016042.1-P | Field mustard | cytosol | 44.76 | 46.6 |
| AT1G17480.1 | Thale cress | cytosol | 39.16 | 45.28 |
| KRH44124 | Soybean | mitochondrion | 43.59 | 44.42 |
| Bra025971.1-P | Field mustard | nucleus | 38.46 | 44.0 |
| CDY26241 | Canola | nucleus | 38.46 | 44.0 |
| CDY48305 | Canola | nucleus | 38.0 | 43.47 |
| KRH23285 | Soybean | nucleus | 41.26 | 42.96 |
| KRH10035 | Soybean | cytosol | 41.49 | 42.79 |
| KRH47099 | Soybean | cytosol | 44.29 | 41.21 |
| TraesCS3B01G280900.1 | Wheat | cytosol | 40.79 | 40.7 |
| TraesCS3A01G251400.1 | Wheat | cytosol | 40.79 | 40.6 |
| TraesCS3D01G251800.2 | Wheat | cytosol | 41.49 | 40.18 |
| Zm00001d043691_P001 | Maize | mitochondrion | 40.56 | 39.64 |
| EES03502 | Sorghum | mitochondrion | 40.33 | 39.59 |
| Os05t0541100-01 | Rice | plastid | 37.53 | 39.46 |
| Os01t0708700-01 | Rice | cytosol | 40.09 | 39.0 |
| Zm00001d038861_P001 | Maize | cytosol, plastid | 38.46 | 38.46 |
| HORVU3Hr1G066840.2 | Barley | cytosol | 36.83 | 37.09 |
| TraesCS1B01G379600.1 | Wheat | mitochondrion | 33.57 | 34.62 |
| TraesCS1A01G362400.1 | Wheat | mitochondrion | 32.17 | 33.74 |
| TraesCS1D01G367300.2 | Wheat | mitochondrion, plastid | 32.17 | 30.6 |
| HORVU1Hr1G079590.12 | Barley | cytosol | 33.1 | 30.34 |
| KXG22437 | Sorghum | mitochondrion, plastid | 38.46 | 30.22 |
| Solyc11g071840.1.1 | Tomato | cytosol | 28.44 | 27.23 |
| Solyc12g014130.1.1 | Tomato | nucleus | 16.08 | 26.44 |
| Solyc04g050050.2.1 | Tomato | cytosol | 23.54 | 25.63 |
| Solyc10g008790.2.1 | Tomato | cytosol | 17.95 | 25.33 |
| Solyc02g077260.2.1 | Tomato | nucleus | 17.48 | 24.83 |
| Solyc03g083100.2.1 | Tomato | nucleus | 24.01 | 21.96 |
| Solyc09g007410.2.1 | Tomato | cytosol | 24.71 | 21.95 |
| Solyc10g084280.1.1 | Tomato | nucleus | 23.54 | 21.13 |
| Solyc10g005000.2.1 | Tomato | nucleus | 19.35 | 21.07 |
| Solyc10g086060.1.1 | Tomato | cytosol | 22.84 | 20.81 |
| Solyc06g052010.1.1 | Tomato | cytosol | 18.18 | 19.65 |
| Solyc08g083240.2.1 | Tomato | nucleus | 21.68 | 19.02 |
| Solyc01g009340.2.1 | Tomato | nucleus | 15.62 | 16.63 |
| Solyc08g014280.2.1 | Tomato | cytosol | 19.81 | 15.77 |
| Solyc06g053450.2.1 | Tomato | nucleus | 17.72 | 12.84 |
Protein Annotations
| EnsemblPlants:Solyc03g121760.2.1 | EnsemblPlantsGene:Solyc03g121760.2 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | InterPro:P-loop_NTPase | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF25 | PFAM:PF00612 |
| PFscan:PS50096 | SEG:seg | SMART:SM00015 | SUPFAM:SSF52540 | UniParc:UPI00027655B2 | UniProt:K4BMX5 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:69830078..69832575
Molecular Weight (calculated)
47639.4 Da
IEP (calculated)
10.549
GRAVY (calculated)
-0.708
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGSGKWIKS LIGLKKNQSN DSEKSCGKNR KWKLWRSASG GIAMAFSKGV KGGGNLGDSD GSESSFLSDS ALAAAIATVI RAPHKDFVVV KQEWAALRIQ
101: AAFRGFLARR ALRALKAVVR LQAIFRGRQV RKQADVTLKC MQTLVKLQSR VRARCNQTSV DGDATKGPLV DSQADPVKQA EGGWCDSPGT VDEVRCKLKM
201: RQVGAIKRER AIAYAQQKLR TNPSLNSRIR KVETLNKFKA NGDSVWLERW MANKPWESRL VEDFHTDASG MTPSSRKYED YDAGSLTDRS SVSIRRNNMS
301: TRISTRGPMS CQIANSSSEP YTDYYQYDDS TTSHSSISTS ETLGSNQTPP EDGHSKKPNY MNLTKSIKAK VKQRNSNYLS HSMQRNSTDN LQVHRKSSPL
401: SRTIARRSAD CDLYSVDLCK DLYPPSNAF
101: AAFRGFLARR ALRALKAVVR LQAIFRGRQV RKQADVTLKC MQTLVKLQSR VRARCNQTSV DGDATKGPLV DSQADPVKQA EGGWCDSPGT VDEVRCKLKM
201: RQVGAIKRER AIAYAQQKLR TNPSLNSRIR KVETLNKFKA NGDSVWLERW MANKPWESRL VEDFHTDASG MTPSSRKYED YDAGSLTDRS SVSIRRNNMS
301: TRISTRGPMS CQIANSSSEP YTDYYQYDDS TTSHSSISTS ETLGSNQTPP EDGHSKKPNY MNLTKSIKAK VKQRNSNYLS HSMQRNSTDN LQVHRKSSPL
401: SRTIARRSAD CDLYSVDLCK DLYPPSNAF
001: MGGSGNWIKS LITNKKNITD DQEKNIKKKW KLWRTSSEGL ISSSKGFKSR GGSYGTPSLG SDPPSFSADD SFTAAVAAVI RAPPKDFFLV KREWAATRIQ
101: AAFRAFLARQ ALRALKAVVR IQAIFRGRQV RKQADVTLRC MQALVRVQAR VRAHCNRGPS DGQELEKPSD QQKDDPAKQA EKGWCDSPGS INEVRTKLQM
201: RQEGAIKRER AMVYALTHQP RTCPSPAKAS KQGSVKKNNG SCKSSPGWNW LDRWVADRPW EGRLMEGPTN SSENARKSES SVSEHDTVQV RKNNLTTRVL
301: ARPPPMSSSA TSSESSSTSQ SPVPFSGSFL EEGGYYRKPS YMSLTQSIKA KQRRSGSSSS CSKTPFEKKQ SMSYNGDVNV RRSAGSDPLN NQWTDLYPPA
401: QVTGRHMWAK SQRG
101: AAFRAFLARQ ALRALKAVVR IQAIFRGRQV RKQADVTLRC MQALVRVQAR VRAHCNRGPS DGQELEKPSD QQKDDPAKQA EKGWCDSPGS INEVRTKLQM
201: RQEGAIKRER AMVYALTHQP RTCPSPAKAS KQGSVKKNNG SCKSSPGWNW LDRWVADRPW EGRLMEGPTN SSENARKSES SVSEHDTVQV RKNNLTTRVL
301: ARPPPMSSSA TSSESSSTSQ SPVPFSGSFL EEGGYYRKPS YMSLTQSIKA KQRRSGSSSS CSKTPFEKKQ SMSYNGDVNV RRSAGSDPLN NQWTDLYPPA
401: QVTGRHMWAK SQRG
Arabidopsis Description
iqd8At1g72670 [Source:UniProtKB/TrEMBL;Acc:Q9CAI2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.