Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400010610 | Potato | nucleus | 97.72 | 83.7 |
| VIT_13s0019g03890.t01 | Wine grape | cytosol | 75.13 | 61.41 |
| Solyc10g084280.1.1 | Tomato | nucleus | 61.17 | 50.42 |
| Solyc09g007410.2.1 | Tomato | cytosol | 59.64 | 48.65 |
| Solyc10g086060.1.1 | Tomato | cytosol | 54.82 | 45.86 |
| CDY38525 | Canola | cytosol | 36.04 | 34.38 |
| Solyc08g062940.2.1 | Tomato | cytosol | 25.89 | 33.01 |
| CDX83237 | Canola | cytosol | 38.83 | 30.18 |
| AT2G26410.2 | Thale cress | cytosol | 39.85 | 29.79 |
| Solyc12g014130.1.1 | Tomato | nucleus | 18.27 | 27.59 |
| Solyc10g008790.2.1 | Tomato | cytosol | 20.56 | 26.64 |
| Solyc03g083100.2.1 | Tomato | nucleus | 31.47 | 26.44 |
| Solyc02g077260.2.1 | Tomato | nucleus | 20.05 | 26.16 |
| Solyc06g052010.1.1 | Tomato | cytosol | 26.14 | 25.94 |
| Solyc10g005000.2.1 | Tomato | nucleus | 25.63 | 25.63 |
| Solyc11g071840.1.1 | Tomato | cytosol | 28.68 | 25.22 |
| Solyc03g121760.2.1 | Tomato | cytosol | 25.63 | 23.54 |
| Solyc08g083240.2.1 | Tomato | nucleus | 29.19 | 23.52 |
| Solyc08g014280.2.1 | Tomato | cytosol | 30.46 | 22.26 |
| Solyc01g009340.2.1 | Tomato | nucleus | 20.3 | 19.85 |
| Solyc06g053450.2.1 | Tomato | nucleus | 28.68 | 19.09 |
Protein Annotations
| EnsemblPlants:Solyc04g050050.2.1 | EnsemblPlantsGene:Solyc04g050050.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF28 | PFAM:PF00612 | PFscan:PS50096 |
| SEG:seg | SMART:SM00015 | UniParc:UPI00027669FC | UniProt:K4BRX8 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr4:-:45319622..45322356
Molecular Weight (calculated)
43533.0 Da
IEP (calculated)
10.898
GRAVY (calculated)
-0.872
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAENEQNKH AYSVAIATAV AAEAAVAAAQ AAAEVVRLTA AACSSGQSKE EIAAIRIQTV FRGYLARRAL KALRGLVRLK AMIQGQSVKR QATSTLRCMQ
101: TLARVQSQVR ARRIRMSEEN QTLQRQLQQK HEKEQEKLKA SSQSGDDWND STRSKEQVDA NLQMKQEAAT RRERALAYAY THQPTRRNPS KSTNQTFMDP
201: NNPHWGWSWL ERWMAARPWE DKCAMDKEPN SDEVAAESPA SQSTAVAAIT HRDFHLDNRP SPTAHKQNRP PSRQSPSTPR SKTGRIRPAS PRVSNVDDDS
301: RSMASAQSER CRRHSIAGSS VRDDESLASS PSVPSYMAAT ESARARSRLP SPLGFEKIGT PEKGSVSSTK KRLSFSASPG GVPRRHSGPP KVEI
101: TLARVQSQVR ARRIRMSEEN QTLQRQLQQK HEKEQEKLKA SSQSGDDWND STRSKEQVDA NLQMKQEAAT RRERALAYAY THQPTRRNPS KSTNQTFMDP
201: NNPHWGWSWL ERWMAARPWE DKCAMDKEPN SDEVAAESPA SQSTAVAAIT HRDFHLDNRP SPTAHKQNRP PSRQSPSTPR SKTGRIRPAS PRVSNVDDDS
301: RSMASAQSER CRRHSIAGSS VRDDESLASS PSVPSYMAAT ESARARSRLP SPLGFEKIGT PEKGSVSSTK KRLSFSASPG GVPRRHSGPP KVEI
001: MGKKAKWFSS VKKAFSPDSK KSKQKLAEGQ NGVISNPPVV DNVRQSSSSP PPALAPREVR VAEVIVERNR DLSPPSTADA VNVTATDVPV VPSSSAPGVV
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
101: RRATPTRFAG KSNEEAAAIL IQTIFRGYLA RRALRAMRGL VRLKLLMEGS VVKRQAANTL KCMQTLSRVQ SQIRARRIRM SEENQARQKQ LLQKHAKELA
201: GLKNGDNWND SIQSKEKVEA NLLSKYEATM RRERALAYSY SHQQNWKNNS KSGNPMFMDP SNPTWGWSWL ERWMAGRPLE SSEKEQSNSN NDNAASVKGS
301: INRNEAAKSL TRNGSTQPNT PSSARGTPRN KNSFFSPPTP SRLNQSSRKS NDDDSKSTIS VLSERNRRHS IAGSSVRDDE SLAGSPALPS YMVPTKSARA
401: RLKPQSPLGG TTQENEGFTD KASAKKRLSY PTSPALPKPR RFSAPPKVES GGVTVTNGAG S
Arabidopsis Description
iqd2At5g03040/F15A17_70 [Source:UniProtKB/TrEMBL;Acc:Q93ZH7]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.