Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83237 | Canola | cytosol | 94.43 | 76.92 |
| AT2G26410.2 | Thale cress | cytosol | 74.09 | 58.06 |
| VIT_13s0019g03890.t01 | Wine grape | cytosol | 43.1 | 36.93 |
| Solyc04g050050.2.1 | Tomato | cytosol | 34.38 | 36.04 |
| PGSC0003DMT400010610 | Potato | nucleus | 38.98 | 35.0 |
| CDX95328 | Canola | cytosol | 37.05 | 34.38 |
| CDY23202 | Canola | cytosol | 36.56 | 33.93 |
| CDY11238 | Canola | cytosol, plastid | 32.2 | 32.2 |
| CDX80849 | Canola | cytosol, plastid | 31.72 | 30.75 |
| CDY10410 | Canola | cytosol, plastid | 31.48 | 29.28 |
| CDY32322 | Canola | cytosol, plastid | 18.16 | 28.96 |
| CDY04876 | Canola | nucleus, plastid | 30.99 | 28.76 |
| CDY17214 | Canola | cytosol, plastid | 18.4 | 28.68 |
| CDY20099 | Canola | cytosol | 18.16 | 28.41 |
| CDY55696 | Canola | nucleus, plastid | 29.78 | 28.15 |
| CDY27925 | Canola | plastid | 17.92 | 27.92 |
| CDX70333 | Canola | cytosol | 31.23 | 26.88 |
| CDY62768 | Canola | cytosol | 17.43 | 25.99 |
| CDX96427 | Canola | cytosol | 13.8 | 23.46 |
| CDX77034 | Canola | cytosol | 21.55 | 22.47 |
| CDY37387 | Canola | cytosol | 20.82 | 22.4 |
| CDY35313 | Canola | nucleus | 21.31 | 22.17 |
| CDX72935 | Canola | cytosol | 14.04 | 22.05 |
| CDX73992 | Canola | nucleus | 25.42 | 22.01 |
| CDY24286 | Canola | cytosol | 21.31 | 21.78 |
| CDX92933 | Canola | cytosol, plastid | 20.82 | 21.45 |
| CDY41307 | Canola | cytosol | 28.33 | 21.39 |
| CDY07937 | Canola | nucleus | 24.7 | 21.34 |
| CDY10618 | Canola | cytosol | 20.82 | 21.18 |
| CDY22198 | Canola | cytosol | 28.09 | 20.75 |
| CDY30433 | Canola | cytosol | 21.79 | 20.0 |
| CDY05917 | Canola | mitochondrion, nucleus | 22.76 | 19.79 |
| CDY23391 | Canola | cytosol | 22.03 | 19.74 |
| CDY05984 | Canola | nucleus | 23.24 | 19.39 |
| CDY08120 | Canola | mitochondrion, nucleus | 22.03 | 19.2 |
| CDX71881 | Canola | nucleus | 22.76 | 19.03 |
| CDX86983 | Canola | nucleus | 21.31 | 18.53 |
| CDX92931 | Canola | mitochondrion, nucleus | 11.38 | 18.43 |
| CDY05111 | Canola | nucleus | 19.13 | 18.41 |
| CDY00196 | Canola | nucleus | 21.07 | 18.32 |
| CDY15200 | Canola | nucleus | 22.28 | 18.0 |
| CDY58749 | Canola | cytosol | 19.85 | 17.98 |
| CDX90766 | Canola | nucleus | 18.64 | 17.87 |
| CDX90011 | Canola | nucleus | 21.79 | 17.72 |
| CDY39505 | Canola | cytosol | 16.71 | 17.47 |
| CDY26241 | Canola | nucleus | 15.5 | 17.07 |
| CDY48305 | Canola | nucleus | 15.5 | 17.07 |
| CDX83468 | Canola | plasma membrane | 22.76 | 17.06 |
| CDY05931 | Canola | nucleus | 14.53 | 17.05 |
| CDY08131 | Canola | nucleus | 14.04 | 16.86 |
| CDY24282 | Canola | mitochondrion | 12.35 | 16.72 |
| CDY44247 | Canola | nucleus | 22.03 | 16.37 |
| CDX79809 | Canola | nucleus | 23.24 | 16.05 |
| CDY66694 | Canola | nucleus | 23.0 | 15.86 |
| CDY69140 | Canola | mitochondrion, nucleus | 20.1 | 15.81 |
| CDX91859 | Canola | mitochondrion, nucleus | 19.85 | 15.47 |
| CDY05918 | Canola | mitochondrion | 9.93 | 13.06 |
| CDX72934 | Canola | nucleus, plastid | 1.69 | 6.86 |
| CDX96426 | Canola | nucleus, plastid | 1.69 | 6.86 |
Protein Annotations
| EnsemblPlants:CDY38525 | EnsemblPlantsGene:GSBRNA2T00066165001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF6 | PFAM:PF00612 | PFscan:PS50096 |
| ProteinID:CDY38525 | ProteinID:CDY38525.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0004EED918 | UniProt:A0A078HJB1 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC03g26720DBnaC03g26720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJB1]
Coordinates
chrLK032425:+:166635..168389
Molecular Weight (calculated)
46104.4 Da
IEP (calculated)
10.842
GRAVY (calculated)
-0.969
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKGWLACVS APCLPTGKDK KHQKQEKEKK KWFGKQKSRE SIEFSLEETT PVDPSSSSIT RQSPPPLPDF PLLPPSSPPP PPFPPYANNK GYDASKEAKT
101: RQALALASAV AAEAAVVAAH AAVEVTRLTL NTSTRQIVES KEEAAAIKIQ NAYRCYKARH TLRMLRGMVR LKTLLQGKYV KRQMNAMLSS MQTLTRLQTQ
201: IQARRNRLSE ENKARHTLIQ QKGHQKERQN QNLIIAGDFD SSNKSKAQIK AQFANRKEAS VRRERALAYA YSHQQTWRNS TKLPHQTLMD ADTPNWGWSW
301: LDRWMASRPW EPISNDDQAS LKRENSIKTS PARSKEPKSG SQKANQSEGV NRRHSIGGGS AESLDSSLSR RSSFGNKETE KSKASVETTS NMTNPQPLKN
401: SNSSSCGNSK KHG
101: RQALALASAV AAEAAVVAAH AAVEVTRLTL NTSTRQIVES KEEAAAIKIQ NAYRCYKARH TLRMLRGMVR LKTLLQGKYV KRQMNAMLSS MQTLTRLQTQ
201: IQARRNRLSE ENKARHTLIQ QKGHQKERQN QNLIIAGDFD SSNKSKAQIK AQFANRKEAS VRRERALAYA YSHQQTWRNS TKLPHQTLMD ADTPNWGWSW
301: LDRWMASRPW EPISNDDQAS LKRENSIKTS PARSKEPKSG SQKANQSEGV NRRHSIGGGS AESLDSSLSR RSSFGNKETE KSKASVETTS NMTNPQPLKN
401: SNSSSCGNSK KHG
001: MGKNWLTCVS VACLSPGKDK KNQKPEKPKR KWSFGKQKSR ESFDFPLEET PPVDPSPSSV HRPYPPPPPL PDFAPQPLLP PPSPPPPPPA YTINTRIYGE
101: SKESKNRQAL ALASAVAAEA AVVAAHAAAE VIRLTTPSTP QIEESKEETA AIKIQNAYRC YTARRTLRAL RGMARLKSLL QGKYVKRQMN AMLSSMQTLT
201: RLQTQIQERR NRLSAENKTR HRLIQQKGHQ KENHQNLVTA GNFDSSNKSK EQIVARSVNR KEASVRRERA LAYAYSHQQT WRNSSKLPHQ TLMDTNTTDW
301: GWSWLERWMA SRPWDAESID DQVSVKSSLK RENSIKSSPA RSKTQKSASQ SSIQWPVNND TKSRKIEVTN RRHSIGGGSS ENAKDDESVG SSSSRRNSLD
401: NTQTVKSKVS VETTSNVSNA QTVKPKANVG AKRNLDNTKT LKSKSSVGTT GNLANTEAVK SKVNVGTTSM PKKEVVADKK KPPQMVLPKK RLSSSTSLGK
501: TKKLSDSDKA TTGVANGEKK RRNGGSS
101: SKESKNRQAL ALASAVAAEA AVVAAHAAAE VIRLTTPSTP QIEESKEETA AIKIQNAYRC YTARRTLRAL RGMARLKSLL QGKYVKRQMN AMLSSMQTLT
201: RLQTQIQERR NRLSAENKTR HRLIQQKGHQ KENHQNLVTA GNFDSSNKSK EQIVARSVNR KEASVRRERA LAYAYSHQQT WRNSSKLPHQ TLMDTNTTDW
301: GWSWLERWMA SRPWDAESID DQVSVKSSLK RENSIKSSPA RSKTQKSASQ SSIQWPVNND TKSRKIEVTN RRHSIGGGSS ENAKDDESVG SSSSRRNSLD
401: NTQTVKSKVS VETTSNVSNA QTVKPKANVG AKRNLDNTKT LKSKSSVGTT GNLANTEAVK SKVNVGTTSM PKKEVVADKK KPPQMVLPKK RLSSSTSLGK
501: TKKLSDSDKA TTGVANGEKK RRNGGSS
Arabidopsis Description
Iqd4IQ-domain 4 [Source:UniProtKB/TrEMBL;Acc:F4IUJ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.