Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021588.1-P | Field mustard | cytosol, plastid | 95.45 | 95.45 |
| CDY32322 | Canola | cytosol, plastid | 93.56 | 95.37 |
| AT3G15050.1 | Thale cress | plastid | 81.44 | 83.01 |
| CDY17214 | Canola | cytosol, plastid | 46.59 | 46.42 |
| CDY27925 | Canola | plastid | 46.59 | 46.42 |
| CDY62768 | Canola | cytosol | 46.59 | 44.4 |
| Solyc12g014130.1.1 | Tomato | nucleus | 43.56 | 44.06 |
| KRH55128 | Soybean | mitochondrion, nucleus | 48.48 | 43.24 |
| KRH27315 | Soybean | cytosol | 48.11 | 43.2 |
| GSMUA_Achr6P14440_001 | Banana | nucleus | 27.65 | 42.69 |
| VIT_19s0014g01690.t01 | Wine grape | cytosol | 49.62 | 42.39 |
| PGSC0003DMT400039646 | Potato | mitochondrion | 46.59 | 41.55 |
| GSMUA_Achr2P20050_001 | Banana | nucleus | 43.94 | 39.19 |
| KRH22000 | Soybean | plastid | 47.73 | 36.73 |
| HORVU7Hr1G024060.1 | Barley | plastid | 24.24 | 36.36 |
| EER87873 | Sorghum | nucleus | 45.45 | 36.04 |
| Zm00001d045305_P001 | Maize | nucleus | 45.08 | 35.52 |
| TraesCS7A01G112000.1 | Wheat | nucleus | 41.29 | 33.33 |
| HORVU7Hr1G023980.1 | Barley | nucleus | 41.29 | 33.33 |
| Os06t0155300-01 | Rice | plasma membrane | 44.32 | 33.14 |
| TraesCS7D01G107600.2 | Wheat | nucleus | 40.91 | 33.03 |
| TraesCS7B01G010100.1 | Wheat | nucleus | 40.53 | 32.72 |
| Zm00001d009320_P001 | Maize | nucleus | 24.62 | 28.14 |
| CDX96427 | Canola | cytosol | 22.35 | 24.28 |
| CDX72935 | Canola | cytosol | 22.73 | 22.81 |
| CDY37387 | Canola | cytosol | 32.2 | 22.14 |
| CDX77034 | Canola | cytosol | 31.82 | 21.21 |
| CDY10618 | Canola | cytosol | 32.2 | 20.94 |
| CDY35313 | Canola | nucleus | 31.44 | 20.91 |
| CDY24286 | Canola | cytosol | 31.82 | 20.79 |
| CDX92933 | Canola | cytosol, plastid | 31.06 | 20.45 |
| CDY58749 | Canola | cytosol | 31.44 | 18.2 |
| CDY38525 | Canola | cytosol | 28.41 | 18.16 |
| CDX92931 | Canola | mitochondrion, nucleus | 17.42 | 18.04 |
| CDY39505 | Canola | cytosol | 26.14 | 17.47 |
| CDY11238 | Canola | cytosol, plastid | 27.27 | 17.43 |
| CDX80849 | Canola | cytosol, plastid | 27.65 | 17.14 |
| CDY10410 | Canola | cytosol, plastid | 26.52 | 15.77 |
| CDY24282 | Canola | mitochondrion | 18.18 | 15.74 |
| CDY48305 | Canola | nucleus | 22.35 | 15.73 |
| CDY26241 | Canola | nucleus | 22.35 | 15.73 |
| CDX95328 | Canola | cytosol | 26.52 | 15.73 |
| CDY23202 | Canola | cytosol | 26.52 | 15.73 |
| CDY55696 | Canola | nucleus, plastid | 25.76 | 15.56 |
| CDY04876 | Canola | nucleus, plastid | 26.14 | 15.51 |
| CDX83237 | Canola | cytosol | 28.41 | 14.79 |
| CDX70333 | Canola | cytosol | 26.14 | 14.38 |
| CDY30433 | Canola | cytosol | 23.11 | 13.56 |
| CDY05111 | Canola | nucleus | 21.59 | 13.29 |
| CDX90766 | Canola | nucleus | 21.59 | 13.23 |
| CDY05984 | Canola | nucleus | 24.62 | 13.13 |
| CDY08131 | Canola | nucleus | 17.05 | 13.08 |
| CDX71881 | Canola | nucleus | 24.24 | 12.96 |
| CDY05931 | Canola | nucleus | 17.05 | 12.78 |
| CDY41307 | Canola | cytosol | 26.14 | 12.61 |
| CDY23391 | Canola | cytosol | 21.59 | 12.36 |
| CDY22198 | Canola | cytosol | 26.14 | 12.34 |
| CDY15200 | Canola | nucleus | 23.86 | 12.33 |
| CDX90011 | Canola | nucleus | 23.48 | 12.2 |
| CDX73992 | Canola | nucleus | 21.97 | 12.16 |
| CDY69140 | Canola | mitochondrion, nucleus | 23.86 | 12.0 |
| CDY07937 | Canola | nucleus | 21.21 | 11.72 |
| CDX91859 | Canola | mitochondrion, nucleus | 23.48 | 11.7 |
| CDY05917 | Canola | mitochondrion, nucleus | 20.83 | 11.58 |
| CDY08120 | Canola | mitochondrion, nucleus | 20.45 | 11.39 |
| CDY00196 | Canola | nucleus | 20.08 | 11.16 |
| CDX86983 | Canola | nucleus | 19.7 | 10.95 |
| CDX83468 | Canola | plasma membrane | 21.97 | 10.53 |
| CDY66694 | Canola | nucleus | 23.48 | 10.35 |
| CDY44247 | Canola | nucleus | 21.59 | 10.25 |
| CDX79809 | Canola | nucleus | 23.11 | 10.2 |
| CDY05918 | Canola | mitochondrion | 10.23 | 8.6 |
| CDX72934 | Canola | nucleus, plastid | 1.14 | 2.94 |
| CDX96426 | Canola | nucleus, plastid | 1.14 | 2.94 |
Protein Annotations
| EnsemblPlants:CDY20099 | EnsemblPlantsGene:GSBRNA2T00009952001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF93 | PFAM:PF00612 | PFscan:PS50096 | ProteinID:CDY20099 |
| ProteinID:CDY20099.1 | UniParc:UPI0004EF087E | UniProt:A0A078G3Y0 | MapMan:35.1 | : | : |
Description
BnaA01g29030DBnaA01g29030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3Y0]
Coordinates
chrLK032103:-:148674..149811
Molecular Weight (calculated)
30284.4 Da
IEP (calculated)
11.003
GRAVY (calculated)
-0.721
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSGWLLRSL VCFKAEKHTK SNQSNVHSET LNHVKPVESS SASTTLTVEI AATRIQKAFR AYKARKRLCS LKSARRFNAL IQGHTVRNQT SIALNVMHSW
101: CDIQSQIRAR RMYMVTQGRL QNKRLENRLK LEIKLHEIEV EWCGGSETME EILARIQQRE EATVKRERAM AYAFSHQWRA NATQYLGQAS FNLDKENWGW
201: SWKERWIAAR PWEIRAQCQV TKPIKPATKP EKLSPPNVST KKTSTKPSLP NIKEAAKSRK PGSG
101: CDIQSQIRAR RMYMVTQGRL QNKRLENRLK LEIKLHEIEV EWCGGSETME EILARIQQRE EATVKRERAM AYAFSHQWRA NATQYLGQAS FNLDKENWGW
201: SWKERWIAAR PWEIRAQCQV TKPIKPATKP EKLSPPNVST KKTSTKPSLP NIKEAAKSRK PGSG
001: MGSGWLLRSI ICLNGTKKNK SNRGNVHSET SNRVKPVESS SAASTKLTVE VAVIRIQKAF RAFKARKRLC SLKSARRFNS LIQGHTVMNQ TSTALNVIHS
101: WYDIQNQIRA RRLYMVTQGR LQHKRLENRL KLEIKLHELE VEWCGGSETM EEILAKIQQK EEATVKRERA MAYAFSHQWR ANATQYLGQA SFNLGKESWG
201: WSWKERWIAA RPWEIRAQCY VVKPIKPSKK PEKSSPNNVI TKTSAKPDEV GNSKKPGSG
101: WYDIQNQIRA RRLYMVTQGR LQHKRLENRL KLEIKLHELE VEWCGGSETM EEILAKIQQK EEATVKRERA MAYAFSHQWR ANATQYLGQA SFNLGKESWG
201: WSWKERWIAA RPWEIRAQCY VVKPIKPSKK PEKSSPNNVI TKTSAKPDEV GNSKKPGSG
Arabidopsis Description
IQD10IQ-domain 10 [Source:UniProtKB/TrEMBL;Acc:Q9LKA0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.