Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83468 | Canola | plasma membrane | 92.81 | 93.65 |
| Bra000318.1-P | Field mustard | nucleus | 94.24 | 88.07 |
| CDY23391 | Canola | cytosol | 58.27 | 70.28 |
| CDY30433 | Canola | cytosol | 56.47 | 69.78 |
| CDX79809 | Canola | nucleus | 72.3 | 67.22 |
| CDY66694 | Canola | nucleus | 71.76 | 66.61 |
| AT2G43680.1 | Thale cress | nucleus | 75.0 | 62.33 |
| CDY05984 | Canola | nucleus | 53.78 | 60.4 |
| CDX71881 | Canola | nucleus | 52.52 | 59.11 |
| KRH50198 | Soybean | cytosol | 46.76 | 48.78 |
| KRH71267 | Soybean | cytosol | 45.68 | 47.48 |
| Solyc08g014280.2.1 | Tomato | cytosol | 42.81 | 44.16 |
| PGSC0003DMT400041427 | Potato | cytosol | 41.91 | 43.55 |
| VIT_05s0094g00530.t01 | Wine grape | cytosol | 46.58 | 43.31 |
| Solyc06g053450.2.1 | Tomato | nucleus | 38.85 | 36.49 |
| GSMUA_Achr8P32220_001 | Banana | cytosol | 28.24 | 35.93 |
| PGSC0003DMT400042121 | Potato | cytosol, mitochondrion | 39.39 | 35.49 |
| GSMUA_Achr7P02870_001 | Banana | mitochondrion | 18.35 | 33.89 |
| EES01898 | Sorghum | cytosol | 30.22 | 29.84 |
| Os01t0896200-01 | Rice | mitochondrion | 17.99 | 29.67 |
| Zm00001d012167_P001 | Maize | cytosol | 29.86 | 28.72 |
| CDY11238 | Canola | cytosol, plastid | 19.96 | 26.88 |
| CDX80849 | Canola | cytosol, plastid | 20.32 | 26.53 |
| TraesCS3D01G392900.1 | Wheat | cytosol | 28.42 | 25.4 |
| CDY04876 | Canola | nucleus, plastid | 20.32 | 25.39 |
| HORVU3Hr1G089690.1 | Barley | cytosol | 28.6 | 25.32 |
| TraesCS3B01G431200.1 | Wheat | cytosol | 28.42 | 25.24 |
| CDY10410 | Canola | cytosol, plastid | 19.96 | 25.0 |
| TraesCS3A01G398900.1 | Wheat | cytosol | 27.88 | 24.88 |
| CDY55696 | Canola | nucleus, plastid | 19.42 | 24.71 |
| CDX96427 | Canola | cytosol | 10.79 | 24.69 |
| CDY17214 | Canola | cytosol, plastid | 11.69 | 24.53 |
| CDX95328 | Canola | cytosol | 19.6 | 24.49 |
| CDY23202 | Canola | cytosol | 19.6 | 24.49 |
| CDY27925 | Canola | plastid | 11.51 | 24.15 |
| CDY62768 | Canola | cytosol | 11.51 | 23.1 |
| CDX70333 | Canola | cytosol | 19.78 | 22.92 |
| CDX72935 | Canola | cytosol | 10.79 | 22.81 |
| CDY38525 | Canola | cytosol | 16.37 | 22.03 |
| CDY32322 | Canola | cytosol, plastid | 10.25 | 22.01 |
| CDY20099 | Canola | cytosol | 10.25 | 21.59 |
| CDX77034 | Canola | cytosol | 15.29 | 21.46 |
| CDY35313 | Canola | nucleus | 15.29 | 21.41 |
| CDY15200 | Canola | nucleus | 18.7 | 20.35 |
| CDX90011 | Canola | nucleus | 18.53 | 20.28 |
| CDY05111 | Canola | nucleus | 15.47 | 20.05 |
| CDX90766 | Canola | nucleus | 15.47 | 19.95 |
| CDY08131 | Canola | nucleus | 12.23 | 19.77 |
| CDY24286 | Canola | cytosol | 14.21 | 19.55 |
| CDY05931 | Canola | nucleus | 12.23 | 19.32 |
| CDY10618 | Canola | cytosol | 14.03 | 19.21 |
| CDX92933 | Canola | cytosol, plastid | 13.85 | 19.2 |
| CDY48305 | Canola | nucleus | 12.95 | 19.2 |
| CDY26241 | Canola | nucleus | 12.95 | 19.2 |
| CDX83237 | Canola | cytosol | 17.45 | 19.13 |
| CDY37387 | Canola | cytosol | 13.13 | 19.01 |
| CDX86983 | Canola | nucleus | 16.01 | 18.74 |
| CDX91859 | Canola | mitochondrion, nucleus | 17.27 | 18.11 |
| CDY00196 | Canola | nucleus | 15.47 | 18.11 |
| CDY05917 | Canola | mitochondrion, nucleus | 15.47 | 18.11 |
| CDY69140 | Canola | mitochondrion, nucleus | 16.73 | 17.71 |
| CDY08120 | Canola | mitochondrion, nucleus | 14.93 | 17.51 |
| CDX73992 | Canola | nucleus | 14.93 | 17.4 |
| CDY41307 | Canola | cytosol | 16.91 | 17.18 |
| CDY22198 | Canola | cytosol | 17.27 | 17.17 |
| CDY39505 | Canola | cytosol | 12.05 | 16.96 |
| CDY07937 | Canola | nucleus | 14.57 | 16.95 |
| CDY58749 | Canola | cytosol | 12.95 | 15.79 |
| CDX92931 | Canola | mitochondrion, nucleus | 6.29 | 13.73 |
| CDX96426 | Canola | nucleus, plastid | 2.52 | 13.73 |
| CDX72934 | Canola | nucleus, plastid | 2.52 | 13.73 |
| CDY05918 | Canola | mitochondrion | 7.55 | 13.38 |
| CDY24282 | Canola | mitochondrion | 6.47 | 11.8 |
Protein Annotations
| EnsemblPlants:CDY44247 | EnsemblPlantsGene:GSBRNA2T00079754001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4005 | InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | ncoils:Coil | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF18 |
| PFAM:PF00612 | PFAM:PF13178 | PFscan:PS50096 | ProteinID:CDY44247 | ProteinID:CDY44247.1 | SEG:seg |
| SMART:SM00015 | UniParc:UPI0004EE058C | UniProt:A0A078I2G8 | MapMan:20.6.2 | : | : |
Description
BnaC03g24390DBnaC03g24390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2G8]
Coordinates
chrLK032583:+:184703..186865
Molecular Weight (calculated)
61860.6 Da
IEP (calculated)
11.291
GRAVY (calculated)
-0.914
Length
556 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKKGSWFSK IKRVFTPHSK EKLGSEAERK SGKEKRKKGF GKLRCGETSS FLPIYREPSS IEKIFGEAER DHNLVFRPPD LSNPSSPSPP LMPASPKPPP
101: SLPRAHLPRS ISPKPPDGSK PLSSSASAPP PPASTRVPSQ RVAPPSVLTP KPVPQRVASP QAVSIKPPSP RPTSPRGDSP QALPLNPSPR LETPEPSSPK
201: HPSPRAEPPR LNAPRATTSR SPSPKAVSPK AVQRQESVPR PEPALSVQHA SATKIQATFR GHKARRSFRA LKGLARLQGV VKGYNVKRQT VNAMKYMQQV
301: VRVQSQIQSC RIKTLENQAQ VEKDEAKWAA FKAGNENWDD SVLTKEERDA RSQRKIDAVI KRERYMAYAY SHKLWKNSPK SAQEVQHSGG LSLWWNWGDR
401: QLPLASPVPN HRQPLRDYMQ TPTRLSPSRC FSQSSNQHRF RQDNNFDTST PTSSRSRFLT PSRYSLGKLR GQDSPFKDDD SFASCPPYPR YMAPTVSAKA
501: KVRPNSNPKE RVMSTPSVSS VVLEKHKTLK SVGNLSIDTT VSMPATVGRK PFNRYV
101: SLPRAHLPRS ISPKPPDGSK PLSSSASAPP PPASTRVPSQ RVAPPSVLTP KPVPQRVASP QAVSIKPPSP RPTSPRGDSP QALPLNPSPR LETPEPSSPK
201: HPSPRAEPPR LNAPRATTSR SPSPKAVSPK AVQRQESVPR PEPALSVQHA SATKIQATFR GHKARRSFRA LKGLARLQGV VKGYNVKRQT VNAMKYMQQV
301: VRVQSQIQSC RIKTLENQAQ VEKDEAKWAA FKAGNENWDD SVLTKEERDA RSQRKIDAVI KRERYMAYAY SHKLWKNSPK SAQEVQHSGG LSLWWNWGDR
401: QLPLASPVPN HRQPLRDYMQ TPTRLSPSRC FSQSSNQHRF RQDNNFDTST PTSSRSRFLT PSRYSLGKLR GQDSPFKDDD SFASCPPYPR YMAPTVSAKA
501: KVRPNSNPKE RVMSTPSVSS VVLEKHKTLK SVGNLSIDTT VSMPATVGRK PFNRYV
001: MVKKGSWFSA IKRVFTPHSK EKLANEPERK SGKEKKKKGF GKLRHGETNS FLPIFREPSS IEKILGEAER DHNLVFRPPT PDRPNPYSAS PPPRPASPRV
101: ASPRPTSPRV ASPRVPSPRA EVPRTLSPKP PSPRAEVPRS LSPKPPSPRA DLPRSLSPKP FDRSKPSSAS ANAPPTLRPA STRVPSQRIT PHSVPSPRPS
201: SPRGASPQAI SSKPPSPRAE PPTLDTPRPP SPRAASLRAD PPRLDAARPT TPRPPSPLAD APRLDAPRPT TPKPPSPRSD PPRLDAPRPT TPKPPSPRSV
301: SPRAVQRREI VYRPEPTLPV QHASATKIQG AFRGYMARKS FRALKGLVRL QGVVRGYSVK RQTINAMKYM QQVVRVQSQI QSRRIKMLEN QAQVEKDEAK
401: WAASEAGNDN WDDSVLTKEE RDSRSQRKTD AIIKRERSMA YAYSRKLWKN SPKSTQDNRS FPQWWNWVDR QNPLASPAPS YSQPQRDFRL TPSRLCPSPL
501: SQSSKQHHIR LDNHFDTSTP RSSRSTFHTP SRPIHTGTSR YSRGRLRGQD SPFKDDDSLT SCPPFPSYMA PTVSAKAKVR PNSNPKERVM GTPVSEKRRM
601: SYPPTQDTFR WNKGSLVMSN SSSHRGPGSP GGVVLEKHKT LKSVGNLSIG STASMATTVG RKEFNRFV
101: ASPRPTSPRV ASPRVPSPRA EVPRTLSPKP PSPRAEVPRS LSPKPPSPRA DLPRSLSPKP FDRSKPSSAS ANAPPTLRPA STRVPSQRIT PHSVPSPRPS
201: SPRGASPQAI SSKPPSPRAE PPTLDTPRPP SPRAASLRAD PPRLDAARPT TPRPPSPLAD APRLDAPRPT TPKPPSPRSD PPRLDAPRPT TPKPPSPRSV
301: SPRAVQRREI VYRPEPTLPV QHASATKIQG AFRGYMARKS FRALKGLVRL QGVVRGYSVK RQTINAMKYM QQVVRVQSQI QSRRIKMLEN QAQVEKDEAK
401: WAASEAGNDN WDDSVLTKEE RDSRSQRKTD AIIKRERSMA YAYSRKLWKN SPKSTQDNRS FPQWWNWVDR QNPLASPAPS YSQPQRDFRL TPSRLCPSPL
501: SQSSKQHHIR LDNHFDTSTP RSSRSTFHTP SRPIHTGTSR YSRGRLRGQD SPFKDDDSLT SCPPFPSYMA PTVSAKAKVR PNSNPKERVM GTPVSEKRRM
601: SYPPTQDTFR WNKGSLVMSN SSSHRGPGSP GGVVLEKHKT LKSVGNLSIG STASMATTVG RKEFNRFV
Arabidopsis Description
IQD14IQD14 [Source:UniProtKB/TrEMBL;Acc:A0A178VRE6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.