Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023846.1-P | Field mustard | cytosol | 90.63 | 85.85 |
| CDX92933 | Canola | cytosol, plastid | 74.68 | 73.57 |
| CDY24286 | Canola | cytosol | 75.19 | 73.51 |
| CDY10618 | Canola | cytosol | 74.18 | 72.17 |
| CDY37387 | Canola | cytosol | 69.37 | 71.35 |
| CDY58749 | Canola | cytosol | 80.76 | 69.96 |
| CDX92931 | Canola | mitochondrion, nucleus | 43.8 | 67.84 |
| CDY24282 | Canola | mitochondrion | 39.49 | 51.15 |
| VIT_06s0009g00210.t01 | Wine grape | cytosol | 53.92 | 47.87 |
| Solyc11g071840.1.1 | Tomato | cytosol | 50.89 | 44.87 |
| KRH26707 | Soybean | cytosol | 47.34 | 44.31 |
| KRH22612 | Soybean | cytosol | 47.59 | 44.24 |
| KRH39086 | Soybean | cytosol | 47.09 | 42.86 |
| GSMUA_Achr4P31410_001 | Banana | cytosol | 46.84 | 42.05 |
| Os03t0787200-01 | Rice | cytosol | 43.54 | 40.76 |
| GSMUA_Achr5P02600_001 | Banana | cytosol | 44.56 | 40.09 |
| GSMUA_Achr4P22800_001 | Banana | cytosol | 43.8 | 39.86 |
| EER90769 | Sorghum | mitochondrion | 43.54 | 39.09 |
| TraesCS5B01G427800.1 | Wheat | cytosol, mitochondrion | 42.28 | 38.84 |
| CDX96427 | Canola | cytosol | 23.8 | 38.68 |
| Zm00001d034366_P003 | Maize | mitochondrion | 43.54 | 38.48 |
| Os12t0619000-01 | Rice | cytosol | 43.04 | 38.46 |
| TraesCS5A01G425800.1 | Wheat | cytosol, mitochondrion | 41.77 | 38.37 |
| TraesCS5D01G037300.2 | Wheat | nucleus | 41.01 | 37.67 |
| HORVU5Hr1G007780.1 | Barley | cytosol | 40.76 | 37.53 |
| KXG24027 | Sorghum | cytosol | 41.77 | 37.5 |
| TraesCS5A01G029600.3 | Wheat | nucleus | 40.76 | 37.1 |
| TraesCSU01G076200.1 | Wheat | cytosol, mitochondrion | 39.49 | 36.28 |
| TraesCS5B01G028200.1 | Wheat | nucleus | 40.51 | 36.12 |
| Os03t0648300-01 | Rice | cytosol | 40.0 | 35.91 |
| CDX72935 | Canola | cytosol | 23.54 | 35.36 |
| EER91163 | Sorghum | cytosol | 37.72 | 35.31 |
| TraesCS5B01G375000.1 | Wheat | nucleus | 38.48 | 34.86 |
| Zm00001d033211_P002 | Maize | cytosol | 37.47 | 34.5 |
| HORVU5Hr1G092660.2 | Barley | nucleus | 37.97 | 34.25 |
| TraesCS5D01G382500.1 | Wheat | nucleus | 37.97 | 34.25 |
| TraesCS5A01G373000.1 | Wheat | nucleus | 37.72 | 34.17 |
| Zm00001d031098_P004 | Maize | cytosol | 42.53 | 33.27 |
| Zm00001d013112_P011 | Maize | mitochondrion | 42.03 | 32.94 |
| CDY35313 | Canola | nucleus | 29.37 | 29.22 |
| CDY27925 | Canola | plastid | 19.49 | 29.06 |
| CDY17214 | Canola | cytosol, plastid | 19.49 | 29.06 |
| CDX77034 | Canola | cytosol | 29.11 | 29.04 |
| CDY26241 | Canola | nucleus | 25.82 | 27.2 |
| CDY48305 | Canola | nucleus | 25.82 | 27.2 |
| CDY62768 | Canola | cytosol | 18.73 | 26.71 |
| CDY32322 | Canola | cytosol, plastid | 17.47 | 26.64 |
| CDY20099 | Canola | cytosol | 17.47 | 26.14 |
| CDY11238 | Canola | cytosol, plastid | 23.54 | 22.52 |
| CDX80849 | Canola | cytosol, plastid | 23.8 | 22.07 |
| CDY55696 | Canola | nucleus, plastid | 24.3 | 21.97 |
| CDY04876 | Canola | nucleus, plastid | 24.56 | 21.8 |
| CDY05931 | Canola | nucleus | 18.73 | 21.02 |
| CDY08131 | Canola | nucleus | 18.23 | 20.93 |
| CDY10410 | Canola | cytosol, plastid | 23.04 | 20.5 |
| CDX95328 | Canola | cytosol | 22.78 | 20.22 |
| CDY23202 | Canola | cytosol | 22.53 | 20.0 |
| CDX90766 | Canola | nucleus | 21.52 | 19.72 |
| CDY05111 | Canola | nucleus | 21.27 | 19.58 |
| CDY15200 | Canola | nucleus | 25.06 | 19.37 |
| CDX90011 | Canola | nucleus | 24.81 | 19.29 |
| CDX70333 | Canola | cytosol | 23.04 | 18.96 |
| CDY08120 | Canola | mitochondrion, nucleus | 22.28 | 18.57 |
| CDY05917 | Canola | mitochondrion, nucleus | 22.28 | 18.53 |
| CDX86983 | Canola | nucleus | 21.27 | 17.68 |
| CDX91859 | Canola | mitochondrion, nucleus | 23.29 | 17.36 |
| CDY00196 | Canola | nucleus | 20.76 | 17.26 |
| CDY69140 | Canola | mitochondrion, nucleus | 22.78 | 17.14 |
| CDY38525 | Canola | cytosol | 17.47 | 16.71 |
| CDY30433 | Canola | cytosol | 18.73 | 16.44 |
| CDY05984 | Canola | nucleus | 20.51 | 16.36 |
| CDX71881 | Canola | nucleus | 20.25 | 16.19 |
| CDY05918 | Canola | mitochondrion | 12.15 | 15.29 |
| CDY23391 | Canola | cytosol | 17.72 | 15.18 |
| CDX83237 | Canola | cytosol | 17.72 | 13.81 |
| CDX73992 | Canola | nucleus | 16.46 | 13.63 |
| CDY07937 | Canola | nucleus | 16.46 | 13.6 |
| CDY41307 | Canola | cytosol | 18.73 | 13.53 |
| CDY66694 | Canola | nucleus | 20.51 | 13.52 |
| CDX79809 | Canola | nucleus | 20.25 | 13.38 |
| CDY22198 | Canola | cytosol | 18.23 | 12.88 |
| CDX83468 | Canola | plasma membrane | 16.96 | 12.16 |
| CDY44247 | Canola | nucleus | 16.96 | 12.05 |
| CDX96426 | Canola | nucleus, plastid | 2.53 | 9.8 |
| CDX72934 | Canola | nucleus, plastid | 2.53 | 9.8 |
Protein Annotations
| EnsemblPlants:CDY39505 | EnsemblPlantsGene:GSBRNA2T00068021001 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF12 | PFAM:PF00612 | PFscan:PS50096 |
| ProteinID:CDY39505 | ProteinID:CDY39505.1 | SEG:seg | SMART:SM00015 | UniParc:UPI0004EE8735 | UniProt:A0A078HM24 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA01g24830DBnaA01g24830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HM24]
Coordinates
chrLK032449:-:257660..259635
Molecular Weight (calculated)
44050.2 Da
IEP (calculated)
10.643
GRAVY (calculated)
-0.695
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MGASGRWIKA LVSFNKSRSS NKDDHVCSFI DMMTMLSRFR KKHSVDLDAE KLQDSYAHSV IDTGVSTSAS LQSYCGAPYE EQSKEHYAAT RIQTAFRAFL
101: ARRALRALKG LVRLQALVRG YSVRKQAAVT LRCMQALVRV QARVRARRVR LLLESETCQQ LQQQLADEAR VREIEEGWCD SIGSVEQIQE KLIKRQEAAA
201: KRERAMAYAL THQWQAETRQ LSAHNGFQPE EKNWGQNRFL DSYLVEDAKL GENNIEQAEN VHKTQMKSAS KMQNTSNLVS GVSSQKATWP PSLSDGDSSS
301: PVISSSMPVV SKARSKPTKD DLAVEVNSRP VAGLRSRKPD RSSRGRLSLP NTGKSLGSQS AKAKRAGTLI PTSQKVAVED NSAQNQRRRN SEPTK
101: ARRALRALKG LVRLQALVRG YSVRKQAAVT LRCMQALVRV QARVRARRVR LLLESETCQQ LQQQLADEAR VREIEEGWCD SIGSVEQIQE KLIKRQEAAA
201: KRERAMAYAL THQWQAETRQ LSAHNGFQPE EKNWGQNRFL DSYLVEDAKL GENNIEQAEN VHKTQMKSAS KMQNTSNLVS GVSSQKATWP PSLSDGDSSS
301: PVISSSMPVV SKARSKPTKD DLAVEVNSRP VAGLRSRKPD RSSRGRLSLP NTGKSLGSQS AKAKRAGTLI PTSQKVAVED NSAQNQRRRN SEPTK
001: MGASGRWIKA LVGFTKSDKS RSSKKDENVK VATKSRFGRK NSVDFDFEKF QDGFEDSNTR SMVDTGVSTS TSLQSYGGVA YDEQSRENRA ATRIQTAYRG
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA
101: FLARRALRAL KGLVRLQALV RGHAVRKQAA VTLRCMQALV RVQARVRARR VRLALELESE TSQQTLQQQL ADEARVREIE EGWCDSIGSV EQIQAKLLKR
201: QEAAAKRERA MAYALTHQWQ AGTRLLSAHS GFQPDKNNWG WNWLERWMAV RPWENRFLDS NLRDDAKLGE NGMEQSENVP KTQIKSVSKM PNTSNLVSGV
301: SSQMTGPCQS DGDSSSPGIS SSIPVVSKAK SKPAKDDLAV EVNSRPGAGP RSHSNPKERS REPNRSSKER LSLPNSGKSL GSQSTKANRA GKLTPASQKV
401: VEEKSAQNQR RRNSDPIKQR LA
Arabidopsis Description
IQD5IQD5 [Source:UniProtKB/TrEMBL;Acc:A0A178VHN2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.